Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC6.83□□□□□ -1.32
Scn1aA2APX8 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC6.82□□□□□ -1.32
Scn1aA2APX8 Gm9403-201ENSMUST00000196299 2181 ntBASIC6.82□□□□□ -1.32
Scn1aA2APX8 Gm44046-201ENSMUST00000203145 2678 ntBASIC6.82□□□□□ -1.32
Scn1aA2APX8 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Scn1aA2APX8 Gm44417-201ENSMUST00000203298 3359 ntBASIC6.82□□□□□ -1.32
Scn1aA2APX8 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC6.82□□□□□ -1.32
Scn1aA2APX8 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Scn1aA2APX8 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Scn1aA2APX8 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC6.82□□□□□ -1.32
Scn1aA2APX8 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Scn1aA2APX8 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Scn1aA2APX8 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Scn1aA2APX8 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Scn1aA2APX8 Gm6820-201ENSMUST00000188803 2173 ntBASIC6.82□□□□□ -1.32
Scn1aA2APX8 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC6.82□□□□□ -1.32
Scn1aA2APX8 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC6.82□□□□□ -1.32
Scn1aA2APX8 Gm38028-201ENSMUST00000193309 2169 ntTSL 5 BASIC6.82□□□□□ -1.32
Scn1aA2APX8 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC6.82□□□□□ -1.32
Scn1aA2APX8 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Scn1aA2APX8 Gm44231-201ENSMUST00000204106 4075 ntBASIC6.82□□□□□ -1.32
Scn1aA2APX8 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC6.82□□□□□ -1.32
Scn1aA2APX8 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Scn1aA2APX8 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Scn1aA2APX8 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Scn1aA2APX8 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
Scn1aA2APX8 Gm4152-201ENSMUST00000172675 259 ntBASIC6.82□□□□□ -1.32
Scn1aA2APX8 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC6.82□□□□□ -1.32
Scn1aA2APX8 Gm18805-201ENSMUST00000206872 655 ntBASIC6.82□□□□□ -1.32
Scn1aA2APX8 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC6.82□□□□□ -1.32
Scn1aA2APX8 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Scn1aA2APX8 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC6.82□□□□□ -1.32
Scn1aA2APX8 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC6.82□□□□□ -1.32
Scn1aA2APX8 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Scn1aA2APX8 Abcb11-204ENSMUST00000180142 4963 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Scn1aA2APX8 Gm42636-201ENSMUST00000197174 2239 ntBASIC6.82□□□□□ -1.32
Scn1aA2APX8 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Scn1aA2APX8 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Scn1aA2APX8 Gm29025-201ENSMUST00000186756 2163 ntTSL 5 BASIC6.81□□□□□ -1.32
Scn1aA2APX8 Gm37090-201ENSMUST00000195694 4105 ntBASIC6.81□□□□□ -1.32
Scn1aA2APX8 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC6.81□□□□□ -1.32
Scn1aA2APX8 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Scn1aA2APX8 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Scn1aA2APX8 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Scn1aA2APX8 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC6.81□□□□□ -1.32
Scn1aA2APX8 Gm11920-201ENSMUST00000118491 563 ntBASIC6.81□□□□□ -1.32
Scn1aA2APX8 Gm22276-201ENSMUST00000122469 129 ntBASIC6.81□□□□□ -1.32
Scn1aA2APX8 Gm25057-201ENSMUST00000157366 88 ntBASIC6.81□□□□□ -1.32
Scn1aA2APX8 Gm26410-201ENSMUST00000157670 261 ntBASIC6.81□□□□□ -1.32
Scn1aA2APX8 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC6.81□□□□□ -1.32
Scn1aA2APX8 Gm23164-201ENSMUST00000175084 111 ntBASIC6.81□□□□□ -1.32
Scn1aA2APX8 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC6.81□□□□□ -1.32
Scn1aA2APX8 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Scn1aA2APX8 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC6.81□□□□□ -1.32
Scn1aA2APX8 Mir3068-201ENSMUST00000083004 136 ntBASIC6.81□□□□□ -1.32
Scn1aA2APX8 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Scn1aA2APX8 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Scn1aA2APX8 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Scn1aA2APX8 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Scn1aA2APX8 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Scn1aA2APX8 A630009H07Rik-201ENSMUST00000208485 2159 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Scn1aA2APX8 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Scn1aA2APX8 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Scn1aA2APX8 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Scn1aA2APX8 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Scn1aA2APX8 AC154482.1-201ENSMUST00000223248 2483 ntBASIC6.81□□□□□ -1.32
Scn1aA2APX8 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Scn1aA2APX8 Gm22374-201ENSMUST00000104583 132 ntBASIC6.81□□□□□ -1.32
Scn1aA2APX8 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Scn1aA2APX8 Gm15016-201ENSMUST00000117300 720 ntBASIC6.81□□□□□ -1.32
Scn1aA2APX8 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Scn1aA2APX8 Gm26162-201ENSMUST00000157793 132 ntBASIC6.81□□□□□ -1.32
Scn1aA2APX8 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Scn1aA2APX8 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC6.81□□□□□ -1.32
Scn1aA2APX8 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC6.81□□□□□ -1.32
Scn1aA2APX8 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Scn1aA2APX8 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC6.81□□□□□ -1.32
Scn1aA2APX8 Gm17824-201ENSMUST00000197690 805 ntBASIC6.81□□□□□ -1.32
Scn1aA2APX8 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC6.81□□□□□ -1.32
Scn1aA2APX8 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC6.81□□□□□ -1.32
Scn1aA2APX8 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC6.81□□□□□ -1.32
Scn1aA2APX8 Gm19212-201ENSMUST00000216642 862 ntBASIC6.81□□□□□ -1.32
Scn1aA2APX8 AC122290.1-201ENSMUST00000225631 1078 ntBASIC6.81□□□□□ -1.32
Scn1aA2APX8 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Scn1aA2APX8 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Scn1aA2APX8 Gm37347-201ENSMUST00000193969 3071 ntBASIC6.81□□□□□ -1.32
Scn1aA2APX8 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Scn1aA2APX8 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Scn1aA2APX8 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Scn1aA2APX8 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC6.81□□□□□ -1.32
Scn1aA2APX8 AC140280.1-201ENSMUST00000227826 1847 ntBASIC6.8□□□□□ -1.32
Scn1aA2APX8 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Scn1aA2APX8 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Scn1aA2APX8 Olfr731-203ENSMUST00000214152 5572 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Scn1aA2APX8 AC152922.2-201ENSMUST00000213353 3879 ntBASIC6.8□□□□□ -1.32
Scn1aA2APX8 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Scn1aA2APX8 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Scn1aA2APX8 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Scn1aA2APX8 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Scn1aA2APX8 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms