Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm29659-201ENSMUST00000187063 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm28473-201ENSMUST00000187325 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm28558-201ENSMUST00000187373 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm28682-201ENSMUST00000187430 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm28738-201ENSMUST00000187480 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm28949-201ENSMUST00000187805 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm28773-201ENSMUST00000187925 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm29470-201ENSMUST00000188007 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm29319-201ENSMUST00000188060 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm29422-201ENSMUST00000188062 694 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm28734-201ENSMUST00000188104 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm28787-201ENSMUST00000188357 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm29312-201ENSMUST00000188724 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm29451-201ENSMUST00000188862 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm29637-201ENSMUST00000188877 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm29033-201ENSMUST00000189114 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm29614-201ENSMUST00000189263 694 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm28751-201ENSMUST00000189287 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm29559-201ENSMUST00000189412 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm28272-201ENSMUST00000189512 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm28483-201ENSMUST00000189519 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm28123-201ENSMUST00000189725 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm28368-201ENSMUST00000189804 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm7867-201ENSMUST00000189856 546 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm29119-201ENSMUST00000189973 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm28716-201ENSMUST00000190217 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm29239-201ENSMUST00000190304 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm28837-201ENSMUST00000190397 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm28968-201ENSMUST00000190413 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm28531-201ENSMUST00000190529 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm28165-201ENSMUST00000190669 694 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm29181-201ENSMUST00000191288 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm38229-201ENSMUST00000191931 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm32347-201ENSMUST00000192944 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm38121-201ENSMUST00000193213 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm38035-201ENSMUST00000194427 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm38350-201ENSMUST00000194789 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm37990-201ENSMUST00000195821 696 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm42581-201ENSMUST00000201774 966 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm42963-201ENSMUST00000202943 1217 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 AC131795.1-201ENSMUST00000219632 426 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm4808-201ENSMUST00000222283 1203 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 AC124395.1-201ENSMUST00000225940 707 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 AC154640.3-201ENSMUST00000227492 846 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 AC165106.1-201ENSMUST00000227580 408 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 AC125117.2-201ENSMUST00000228344 1140 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm24036-201ENSMUST00000082868 156 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Gm43421-201ENSMUST00000200044 2905 ntBASIC6.26□□□□□ -1.41
Trim3Q9R1R2 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Gm43557-201ENSMUST00000197100 2370 ntBASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Gm9314-201ENSMUST00000199881 1528 ntBASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Robo2-210ENSMUST00000226478 8059 ntBASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 AC154406.1-201ENSMUST00000215220 2529 ntBASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Gm9144-201ENSMUST00000101625 1008 ntBASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Gm7821-201ENSMUST00000117111 788 ntBASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Gm14550-201ENSMUST00000117918 407 ntBASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Gm14070-201ENSMUST00000120773 428 ntBASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Gm11882-201ENSMUST00000121463 506 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms