Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm28122-201ENSMUST00000187088 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm28420-201ENSMUST00000187340 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm28106-201ENSMUST00000187640 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm28698-201ENSMUST00000187734 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm29224-201ENSMUST00000187965 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm29189-201ENSMUST00000188018 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm29476-201ENSMUST00000188397 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm29505-201ENSMUST00000188424 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm28125-201ENSMUST00000188470 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm29391-201ENSMUST00000188545 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm29280-201ENSMUST00000188571 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm28349-201ENSMUST00000188590 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm29652-201ENSMUST00000188622 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm28819-206ENSMUST00000188816 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm29079-201ENSMUST00000188875 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm28213-201ENSMUST00000189183 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm29382-201ENSMUST00000189549 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm29377-205ENSMUST00000189603 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm28327-201ENSMUST00000189638 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm28790-201ENSMUST00000189642 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm28907-201ENSMUST00000189700 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm29586-207ENSMUST00000189745 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm29115-201ENSMUST00000189870 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm28366-201ENSMUST00000190147 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm29212-201ENSMUST00000190384 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm29533-201ENSMUST00000190403 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm28162-201ENSMUST00000190545 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm29030-201ENSMUST00000190848 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm28742-201ENSMUST00000191001 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm28899-201ENSMUST00000191161 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm29567-201ENSMUST00000191188 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm28222-201ENSMUST00000191210 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm28776-201ENSMUST00000191282 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm29306-201ENSMUST00000191366 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm29618-201ENSMUST00000191423 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm28136-210ENSMUST00000191432 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm29251-201ENSMUST00000191480 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm28658-201ENSMUST00000191532 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm32180-201ENSMUST00000192415 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm30598-201ENSMUST00000192620 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm37627-201ENSMUST00000194585 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm34274-201ENSMUST00000195825 615 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Igkv4-83-201ENSMUST00000196933 334 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 AC133598.4-201ENSMUST00000224577 454 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 AC154361.1-201ENSMUST00000225694 745 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 CT025667.1-201ENSMUST00000225872 382 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm25587-201ENSMUST00000082498 166 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm15425-201ENSMUST00000119013 2711 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC6.42□□□□□ -1.38
Lima1Q9ERG0 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Lima1Q9ERG0 CT030185.2-201ENSMUST00000222614 1310 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 AC160028.2-201ENSMUST00000218937 2519 ntBASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Lima1Q9ERG0 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Lima1Q9ERG0 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Lima1Q9ERG0 Mir683-2-201ENSMUST00000102099 109 ntBASIC6.41□□□□□ -1.38
Lima1Q9ERG0 Gm23527-201ENSMUST00000104570 130 ntBASIC6.41□□□□□ -1.38
Lima1Q9ERG0 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Lima1Q9ERG0 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
Lima1Q9ERG0 Gm11976-201ENSMUST00000119236 295 ntBASIC6.41□□□□□ -1.38
Lima1Q9ERG0 Gm11689-201ENSMUST00000120766 302 ntBASIC6.41□□□□□ -1.38
Lima1Q9ERG0 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC6.41□□□□□ -1.38
Lima1Q9ERG0 Gm14728-201ENSMUST00000122196 492 ntBASIC6.41□□□□□ -1.38
Lima1Q9ERG0 Gm23077-201ENSMUST00000157854 116 ntBASIC6.41□□□□□ -1.38
Lima1Q9ERG0 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
Lima1Q9ERG0 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Lima1Q9ERG0 Mir683-1-201ENSMUST00000179371 109 ntBASIC6.41□□□□□ -1.38
Lima1Q9ERG0 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Lima1Q9ERG0 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Lima1Q9ERG0 Gm28119-201ENSMUST00000185538 298 ntTSL 5 BASIC6.41□□□□□ -1.38
Lima1Q9ERG0 Ighv1-17-201ENSMUST00000194435 350 ntBASIC6.41□□□□□ -1.38
Lima1Q9ERG0 Gm8182-201ENSMUST00000197863 769 ntBASIC6.41□□□□□ -1.38
Lima1Q9ERG0 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC6.41□□□□□ -1.38
Lima1Q9ERG0 AC099934.1-201ENSMUST00000200493 79 ntBASIC6.41□□□□□ -1.38
Lima1Q9ERG0 Gm9357-201ENSMUST00000207138 805 ntBASIC6.41□□□□□ -1.38
Lima1Q9ERG0 Gm20136-201ENSMUST00000207501 891 ntBASIC6.41□□□□□ -1.38
Lima1Q9ERG0 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Lima1Q9ERG0 AC153943.1-201ENSMUST00000219312 256 ntBASIC6.41□□□□□ -1.38
Lima1Q9ERG0 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Lima1Q9ERG0 AC131117.2-202ENSMUST00000224539 547 ntBASIC6.41□□□□□ -1.38
Lima1Q9ERG0 AC115304.1-202ENSMUST00000226850 837 ntBASIC6.41□□□□□ -1.38
Lima1Q9ERG0 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Lima1Q9ERG0 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms