Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Gm44620-201ENSMUST00000209183 2887 ntBASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Gm37310-201ENSMUST00000195237 2968 ntBASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Speer4e-201ENSMUST00000159973 1603 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Gm25311-201ENSMUST00000104136 132 ntBASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Gm25631-201ENSMUST00000104390 130 ntBASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Gm11105-201ENSMUST00000112781 478 ntBASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Gm6743-201ENSMUST00000117345 1066 ntBASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Gm7113-201ENSMUST00000120477 958 ntBASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Gm17022-201ENSMUST00000166415 922 ntBASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Gm21772-201ENSMUST00000169213 478 ntBASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Gm17126-201ENSMUST00000172276 523 ntBASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Gm20491-201ENSMUST00000173765 1241 ntBASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Gm18953-201ENSMUST00000175694 300 ntBASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Gm20778-201ENSMUST00000178524 627 ntBASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Gm28438-201ENSMUST00000188299 345 ntBASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Gm7412-201ENSMUST00000191692 605 ntBASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Ighv8-15-201ENSMUST00000197770 294 ntBASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Gm18215-201ENSMUST00000204429 798 ntBASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Gm44554-201ENSMUST00000208738 147 ntBASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Ldhc-204ENSMUST00000210585 1071 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Gm9604-201ENSMUST00000211175 433 ntBASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 AC127242.3-201ENSMUST00000222009 580 ntBASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 AC165157.1-201ENSMUST00000222981 580 ntBASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 AC091783.3-201ENSMUST00000223969 681 ntBASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 AC154692.1-202ENSMUST00000226632 1231 ntBASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Gm25189-201ENSMUST00000083911 164 ntBASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Mir455-201ENSMUST00000093594 82 ntBASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.24
Ddx56Q9D0R4 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.24
Ddx56Q9D0R4 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.24
Ddx56Q9D0R4 Gm43330-201ENSMUST00000199706 2153 ntBASIC7.27□□□□□ -1.24
Ddx56Q9D0R4 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC7.27□□□□□ -1.24
Ddx56Q9D0R4 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
Ddx56Q9D0R4 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Gm45876-201ENSMUST00000212698 2709 ntBASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Gm25379-201ENSMUST00000104338 114 ntBASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Gm13679-201ENSMUST00000118678 484 ntBASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Gm11653-201ENSMUST00000119992 1009 ntBASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Gm12372-201ENSMUST00000121654 768 ntBASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Gm22025-201ENSMUST00000122734 302 ntBASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Gm16357-201ENSMUST00000144091 474 ntBASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC7.27□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 133.4 ms