Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Gm26144-201ENSMUST00000104475 132 ntBASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Gm12451-201ENSMUST00000121636 633 ntBASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Gm4886-201ENSMUST00000121874 1176 ntBASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Gm12778-201ENSMUST00000122341 333 ntBASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Gm3326-201ENSMUST00000164656 1043 ntBASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Gm9672-201ENSMUST00000166437 425 ntBASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Gm22569-201ENSMUST00000175545 124 ntBASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Gm37189-201ENSMUST00000192131 298 ntBASIC7.46□□□□□ -1.22
Smc1aQ9CU62 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Gm44411-201ENSMUST00000204172 349 ntBASIC7.46□□□□□ -1.22
Smc1aQ9CU62 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Smc1aQ9CU62 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Gm22581-201ENSMUST00000083735 136 ntBASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Gm16020-201ENSMUST00000084281 210 ntBASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
Smc1aQ9CU62 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC7.45□□□□□ -1.22
Smc1aQ9CU62 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Smc1aQ9CU62 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC7.45□□□□□ -1.22
Smc1aQ9CU62 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Smc1aQ9CU62 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Smc1aQ9CU62 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Smc1aQ9CU62 AC130661.1-201ENSMUST00000218248 1680 ntBASIC7.45□□□□□ -1.22
Smc1aQ9CU62 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC7.45□□□□□ -1.22
Smc1aQ9CU62 CT573019.1-201ENSMUST00000227762 1689 ntBASIC7.45□□□□□ -1.22
Smc1aQ9CU62 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Smc1aQ9CU62 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Smc1aQ9CU62 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Smc1aQ9CU62 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Smc1aQ9CU62 Gm14116-201ENSMUST00000117733 805 ntBASIC7.45□□□□□ -1.22
Smc1aQ9CU62 Gm11501-201ENSMUST00000118039 581 ntBASIC7.45□□□□□ -1.22
Smc1aQ9CU62 Gm12573-201ENSMUST00000118158 286 ntBASIC7.45□□□□□ -1.22
Smc1aQ9CU62 Gm8812-201ENSMUST00000118496 412 ntBASIC7.45□□□□□ -1.22
Smc1aQ9CU62 Gm5319-201ENSMUST00000118965 873 ntBASIC7.45□□□□□ -1.22
Smc1aQ9CU62 Gm14251-201ENSMUST00000122133 279 ntBASIC7.45□□□□□ -1.22
Smc1aQ9CU62 Gm11434-201ENSMUST00000122379 629 ntBASIC7.45□□□□□ -1.22
Smc1aQ9CU62 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC7.45□□□□□ -1.22
Smc1aQ9CU62 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Smc1aQ9CU62 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Smc1aQ9CU62 Gm25395-201ENSMUST00000157343 272 ntBASIC7.45□□□□□ -1.22
Smc1aQ9CU62 Gm4613-201ENSMUST00000165488 276 ntBASIC7.45□□□□□ -1.22
Smc1aQ9CU62 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC7.45□□□□□ -1.22
Smc1aQ9CU62 Mir7082-201ENSMUST00000183526 92 ntBASIC7.45□□□□□ -1.22
Smc1aQ9CU62 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC7.45□□□□□ -1.22
Smc1aQ9CU62 Gm37328-201ENSMUST00000193191 640 ntBASIC7.45□□□□□ -1.22
Smc1aQ9CU62 Gm45279-201ENSMUST00000210315 391 ntBASIC7.45□□□□□ -1.22
Smc1aQ9CU62 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Smc1aQ9CU62 AC131654.1-201ENSMUST00000219675 745 ntBASIC7.45□□□□□ -1.22
Smc1aQ9CU62 Mylf-ps-201ENSMUST00000222174 421 ntBASIC7.45□□□□□ -1.22
Smc1aQ9CU62 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Smc1aQ9CU62 CT009711.2-201ENSMUST00000225352 934 ntBASIC7.45□□□□□ -1.22
Smc1aQ9CU62 CT009711.4-201ENSMUST00000225685 198 ntBASIC7.45□□□□□ -1.22
Smc1aQ9CU62 Vmn1r41-202ENSMUST00000226337 888 ntBASIC7.45□□□□□ -1.22
Smc1aQ9CU62 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC7.45□□□□□ -1.22
Smc1aQ9CU62 AC154324.1-201ENSMUST00000226711 814 ntBASIC7.45□□□□□ -1.22
Smc1aQ9CU62 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Smc1aQ9CU62 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Smc1aQ9CU62 n-R5s217-201ENSMUST00000083341 116 ntBASIC7.45□□□□□ -1.22
Smc1aQ9CU62 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Smc1aQ9CU62 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC7.45□□□□□ -1.22
Smc1aQ9CU62 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Smc1aQ9CU62 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC7.45□□□□□ -1.22
Smc1aQ9CU62 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Smc1aQ9CU62 AC132465.1-201ENSMUST00000219938 1307 ntBASIC7.45□□□□□ -1.22
Smc1aQ9CU62 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Smc1aQ9CU62 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Smc1aQ9CU62 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Smc1aQ9CU62 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Smc1aQ9CU62 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Smc1aQ9CU62 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 116.7 ms