Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Gm22152-201ENSMUST00000116966 125 ntBASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Gm7803-201ENSMUST00000117176 1015 ntBASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Gm11407-201ENSMUST00000120362 1058 ntBASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Gm26407-201ENSMUST00000158504 307 ntBASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Gm15740-201ENSMUST00000159703 1292 ntBASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Gm24369-201ENSMUST00000175387 96 ntBASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Gm5272-201ENSMUST00000182730 982 ntBASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Gm27225-201ENSMUST00000183833 557 ntBASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Gm29513-201ENSMUST00000185741 202 ntBASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Gm8282-201ENSMUST00000187559 483 ntBASIC8.23□□□□□ -1.09
Trim11Q99PQ2 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim11Q99PQ2 1700020D05Rik-201ENSMUST00000189704 1021 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Gm29435-201ENSMUST00000191310 689 ntBASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Gm38305-201ENSMUST00000194825 223 ntBASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Gm44253-201ENSMUST00000203387 628 ntBASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC8.23□□□□□ -1.09
Trim11Q99PQ2 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Gm24924-201ENSMUST00000084007 164 ntBASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Gm10693-201ENSMUST00000144146 2037 ntBASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Gm43728-201ENSMUST00000198817 2622 ntBASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Malat1-201ENSMUST00000172812 6983 ntBASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Trim11Q99PQ2 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Gm12021-201ENSMUST00000121061 1746 ntBASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Olfr93-203ENSMUST00000219235 2929 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Trim11Q99PQ2 Gm14976-201ENSMUST00000117055 1394 ntBASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Trim11Q99PQ2 1810018F18Rik-202ENSMUST00000189546 1447 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Trim11Q99PQ2 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Olfr1441-202ENSMUST00000214153 2078 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Etnppl-202ENSMUST00000163620 1482 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Trim11Q99PQ2 CT009757.6-201ENSMUST00000220661 2312 ntBASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Gm23484-201ENSMUST00000104178 131 ntBASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Gm22342-201ENSMUST00000122647 298 ntBASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Gm16300-201ENSMUST00000160031 1279 ntBASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Gm17091-201ENSMUST00000163248 357 ntBASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Gm19840-201ENSMUST00000169624 882 ntBASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Gm21756-201ENSMUST00000178380 930 ntBASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Gm21405-201ENSMUST00000179024 930 ntBASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Ets1-205ENSMUST00000184364 678 ntTSL 5 BASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Gm29299-201ENSMUST00000185609 923 ntBASIC8.22□□□□□ -1.09
Trim11Q99PQ2 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms