Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Ccdc28aQ8CEI3 Gm9529-201ENSMUST00000177598 579 ntBASIC6.82□□□□□ -1.32
Ccdc28aQ8CEI3 Mir6367-201ENSMUST00000183385 102 ntBASIC6.82□□□□□ -1.32
Ccdc28aQ8CEI3 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Ccdc28aQ8CEI3 Gm20690-202ENSMUST00000195126 355 ntBASIC6.82□□□□□ -1.32
Ccdc28aQ8CEI3 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc28aQ8CEI3 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC6.82□□□□□ -1.32
Ccdc28aQ8CEI3 Gm43089-201ENSMUST00000199162 275 ntBASIC6.82□□□□□ -1.32
Ccdc28aQ8CEI3 Gm42799-201ENSMUST00000201331 328 ntBASIC6.82□□□□□ -1.32
Ccdc28aQ8CEI3 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc28aQ8CEI3 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC6.82□□□□□ -1.32
Ccdc28aQ8CEI3 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc28aQ8CEI3 RMST_1.1-203ENSMUST00000217866 775 ntTSL 3 BASIC6.82□□□□□ -1.32
Ccdc28aQ8CEI3 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc28aQ8CEI3 Gm6054-201ENSMUST00000078052 378 ntBASIC6.82□□□□□ -1.32
Ccdc28aQ8CEI3 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Ccdc28aQ8CEI3 Gm6166-201ENSMUST00000098689 409 ntBASIC6.82□□□□□ -1.32
Ccdc28aQ8CEI3 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Ccdc28aQ8CEI3 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC6.82□□□□□ -1.32
Ccdc28aQ8CEI3 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC6.82□□□□□ -1.32
Ccdc28aQ8CEI3 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Ccdc28aQ8CEI3 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Ccdc28aQ8CEI3 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC6.82□□□□□ -1.32
Ccdc28aQ8CEI3 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC6.82□□□□□ -1.32
Ccdc28aQ8CEI3 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc28aQ8CEI3 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 CT030185.2-201ENSMUST00000222614 1310 ntBASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 Gm25631-201ENSMUST00000104390 130 ntBASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 Gm11889-201ENSMUST00000118402 1079 ntBASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 Gm13740-201ENSMUST00000120590 310 ntBASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 Gm4887-201ENSMUST00000122230 1053 ntBASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 Gm22276-201ENSMUST00000122469 129 ntBASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 Gm11816-202ENSMUST00000149848 714 ntTSL 2 BASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 Gm7651-201ENSMUST00000173398 901 ntBASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 Gm23810-201ENSMUST00000175150 74 ntBASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 Gm28580-201ENSMUST00000186767 88 ntBASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 Gm7343-201ENSMUST00000194510 1061 ntBASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 Gm44068-201ENSMUST00000204049 2128 ntBASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 Gm4548-201ENSMUST00000208487 509 ntBASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 AC165260.1-201ENSMUST00000224127 683 ntBASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 Gm24621-201ENSMUST00000082679 140 ntBASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 Gm42892-201ENSMUST00000196227 3973 ntBASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 Gm44194-201ENSMUST00000204222 3229 ntBASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Ccdc28aQ8CEI3 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Gm38200-201ENSMUST00000192083 2111 ntBASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Gm14367-201ENSMUST00000119214 1497 ntBASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Gm37086-201ENSMUST00000193082 3452 ntBASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 AC116950.1-201ENSMUST00000226322 3250 ntBASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Serpina3h-202ENSMUST00000116393 1226 ntBASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Gm13338-201ENSMUST00000120235 361 ntBASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Gm8089-201ENSMUST00000122463 968 ntBASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Gm26182-201ENSMUST00000157688 116 ntBASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Gm20432-201ENSMUST00000173716 250 ntBASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Gm9658-201ENSMUST00000182757 1012 ntBASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Gm20257-201ENSMUST00000185352 936 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms