Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm18006-201ENSMUST00000177411 662 ntBASIC9.24□□□□□ -0.93
Usp47Q8BY87 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC9.24□□□□□ -0.93
Usp47Q8BY87 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC9.24□□□□□ -0.93
Usp47Q8BY87 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC9.24□□□□□ -0.93
Usp47Q8BY87 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC9.24□□□□□ -0.93
Usp47Q8BY87 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC9.24□□□□□ -0.93
Usp47Q8BY87 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC9.24□□□□□ -0.93
Usp47Q8BY87 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC9.24□□□□□ -0.93
Usp47Q8BY87 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC9.24□□□□□ -0.93
Usp47Q8BY87 Rps12l1-201ENSMUST00000183090 399 ntBASIC9.24□□□□□ -0.93
Usp47Q8BY87 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC9.24□□□□□ -0.93
Usp47Q8BY87 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC9.24□□□□□ -0.93
Usp47Q8BY87 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC9.24□□□□□ -0.93
Usp47Q8BY87 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC9.24□□□□□ -0.93
Usp47Q8BY87 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC9.24□□□□□ -0.93
Usp47Q8BY87 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC9.24□□□□□ -0.93
Usp47Q8BY87 Gm37177-201ENSMUST00000193768 417 ntBASIC9.24□□□□□ -0.93
Usp47Q8BY87 Gm37809-201ENSMUST00000195050 931 ntBASIC9.24□□□□□ -0.93
Usp47Q8BY87 BC049739-201ENSMUST00000202626 660 ntBASIC9.24□□□□□ -0.93
Usp47Q8BY87 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC9.24□□□□□ -0.93
Usp47Q8BY87 AC154481.1-201ENSMUST00000223532 331 ntBASIC9.24□□□□□ -0.93
Usp47Q8BY87 AC156559.2-201ENSMUST00000224403 384 ntBASIC9.24□□□□□ -0.93
Usp47Q8BY87 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Usp47Q8BY87 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Usp47Q8BY87 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
Usp47Q8BY87 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Usp47Q8BY87 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Usp47Q8BY87 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Usp47Q8BY87 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Usp47Q8BY87 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Usp47Q8BY87 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Usp47Q8BY87 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Usp47Q8BY87 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Usp47Q8BY87 Cyp2c55-201ENSMUST00000025966 1995 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Usp47Q8BY87 Gm44417-201ENSMUST00000203298 3359 ntBASIC9.23□□□□□ -0.93
Usp47Q8BY87 Cdh23-201ENSMUST00000073242 10688 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Usp47Q8BY87 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Usp47Q8BY87 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Usp47Q8BY87 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Usp47Q8BY87 Gm13566-201ENSMUST00000117428 1142 ntBASIC9.23□□□□□ -0.93
Usp47Q8BY87 Gm15967-201ENSMUST00000120027 1116 ntBASIC9.23□□□□□ -0.93
Usp47Q8BY87 Calr-ps-201ENSMUST00000121776 485 ntBASIC9.23□□□□□ -0.93
Usp47Q8BY87 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Usp47Q8BY87 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Usp47Q8BY87 Gm25057-201ENSMUST00000157366 88 ntBASIC9.23□□□□□ -0.93
Usp47Q8BY87 Mir1960-201ENSMUST00000157488 78 ntBASIC9.23□□□□□ -0.93
Usp47Q8BY87 Gm22094-201ENSMUST00000158976 117 ntBASIC9.23□□□□□ -0.93
Usp47Q8BY87 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Usp47Q8BY87 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC9.23□□□□□ -0.93
Usp47Q8BY87 Gm5260-201ENSMUST00000186157 949 ntBASIC9.23□□□□□ -0.93
Usp47Q8BY87 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC9.23□□□□□ -0.93
Usp47Q8BY87 Gm38237-201ENSMUST00000193366 376 ntBASIC9.23□□□□□ -0.93
Usp47Q8BY87 Gm18952-201ENSMUST00000194471 846 ntBASIC9.23□□□□□ -0.93
Usp47Q8BY87 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC9.23□□□□□ -0.93
Usp47Q8BY87 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Usp47Q8BY87 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Usp47Q8BY87 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC9.23□□□□□ -0.93
Usp47Q8BY87 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC9.23□□□□□ -0.93
Usp47Q8BY87 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC9.23□□□□□ -0.93
Usp47Q8BY87 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Usp47Q8BY87 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Usp47Q8BY87 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC9.22□□□□□ -0.93
Usp47Q8BY87 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC9.22□□□□□ -0.93
Usp47Q8BY87 Gm38028-201ENSMUST00000193309 2169 ntTSL 5 BASIC9.22□□□□□ -0.93
Usp47Q8BY87 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC9.22□□□□□ -0.93
Usp47Q8BY87 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Usp47Q8BY87 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Usp47Q8BY87 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Usp47Q8BY87 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Usp47Q8BY87 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Usp47Q8BY87 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Usp47Q8BY87 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Usp47Q8BY87 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Usp47Q8BY87 Olfr1219-205ENSMUST00000217421 5849 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Usp47Q8BY87 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC9.22□□□□□ -0.93
Usp47Q8BY87 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Usp47Q8BY87 Dnah9-201ENSMUST00000080665 13798 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Usp47Q8BY87 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Usp47Q8BY87 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Usp47Q8BY87 AC154612.1-202ENSMUST00000224806 1725 ntBASIC9.22□□□□□ -0.93
Usp47Q8BY87 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Usp47Q8BY87 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC9.22□□□□□ -0.93
Usp47Q8BY87 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC9.22□□□□□ -0.93
Usp47Q8BY87 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC9.22□□□□□ -0.93
Usp47Q8BY87 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Usp47Q8BY87 Gm9027-201ENSMUST00000165914 661 ntBASIC9.22□□□□□ -0.93
Usp47Q8BY87 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC9.22□□□□□ -0.93
Usp47Q8BY87 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Usp47Q8BY87 Gm43850-201ENSMUST00000202021 578 ntBASIC9.22□□□□□ -0.93
Usp47Q8BY87 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC9.22□□□□□ -0.93
Usp47Q8BY87 AC158521.1-202ENSMUST00000224352 645 ntBASIC9.22□□□□□ -0.93
Usp47Q8BY87 AC113031.1-201ENSMUST00000227400 432 ntBASIC9.22□□□□□ -0.93
Usp47Q8BY87 AC139197.1-201ENSMUST00000228332 813 ntBASIC9.22□□□□□ -0.93
Usp47Q8BY87 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Usp47Q8BY87 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Usp47Q8BY87 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Usp47Q8BY87 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Usp47Q8BY87 AC154406.1-201ENSMUST00000215220 2529 ntBASIC9.21□□□□□ -0.93
Usp47Q8BY87 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Usp47Q8BY87 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms