Protein–RNA interactions for Protein: Q6KCD5

Nipbl, Nipped-B-like protein, mousemouse

Known RBP Predictions only

Length 2,798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NipblQ6KCD5 Gm11481-201ENSMUST00000120069 255 ntBASIC5.11□□□□□ -1.59
NipblQ6KCD5 Gm23426-201ENSMUST00000122483 318 ntBASIC5.11□□□□□ -1.59
NipblQ6KCD5 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC5.11□□□□□ -1.59
NipblQ6KCD5 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NipblQ6KCD5 Gm9499-201ENSMUST00000180888 964 ntBASIC5.11□□□□□ -1.59
NipblQ6KCD5 Gm18430-201ENSMUST00000197534 682 ntBASIC5.11□□□□□ -1.59
NipblQ6KCD5 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC5.11□□□□□ -1.59
NipblQ6KCD5 Gm5457-201ENSMUST00000022260 333 ntBASIC5.11□□□□□ -1.59
NipblQ6KCD5 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NipblQ6KCD5 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
NipblQ6KCD5 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC5.11□□□□□ -1.59
NipblQ6KCD5 Gm44178-201ENSMUST00000205229 2930 ntBASIC5.11□□□□□ -1.59
NipblQ6KCD5 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NipblQ6KCD5 AC164978.1-201ENSMUST00000228608 4011 ntBASIC5.11□□□□□ -1.59
NipblQ6KCD5 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
NipblQ6KCD5 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
NipblQ6KCD5 Frmd4b-204ENSMUST00000113359 4311 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NipblQ6KCD5 Rbbp6-201ENSMUST00000052135 6184 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
NipblQ6KCD5 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NipblQ6KCD5 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC5.11□□□□□ -1.59
NipblQ6KCD5 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC5.11□□□□□ -1.59
NipblQ6KCD5 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC5.11□□□□□ -1.59
NipblQ6KCD5 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC5.11□□□□□ -1.59
NipblQ6KCD5 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC5.11□□□□□ -1.59
NipblQ6KCD5 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC5.11□□□□□ -1.59
NipblQ6KCD5 Vmn1r52-203ENSMUST00000227100 2307 ntBASIC5.11□□□□□ -1.59
NipblQ6KCD5 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC5.11□□□□□ -1.59
NipblQ6KCD5 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
NipblQ6KCD5 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NipblQ6KCD5 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NipblQ6KCD5 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
NipblQ6KCD5 Amy1-202ENSMUST00000106540 1771 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NipblQ6KCD5 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
NipblQ6KCD5 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
NipblQ6KCD5 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
NipblQ6KCD5 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Gm26422-201ENSMUST00000104276 132 ntBASIC5.1□□□□□ -1.59
NipblQ6KCD5 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Gm27853-201ENSMUST00000184176 250 ntBASIC5.1□□□□□ -1.59
NipblQ6KCD5 Gm7838-201ENSMUST00000203221 1189 ntBASIC5.1□□□□□ -1.59
NipblQ6KCD5 Gm17988-201ENSMUST00000208796 535 ntBASIC5.1□□□□□ -1.59
NipblQ6KCD5 AC123656.1-201ENSMUST00000227121 581 ntBASIC5.1□□□□□ -1.59
NipblQ6KCD5 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NipblQ6KCD5 AC153940.1-201ENSMUST00000220149 5300 ntBASIC5.1□□□□□ -1.59
NipblQ6KCD5 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NipblQ6KCD5 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Ank1-213ENSMUST00000141784 6566 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Gm10687-201ENSMUST00000180670 3233 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Myt1-202ENSMUST00000108756 5509 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Trip12-207ENSMUST00000186648 6442 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Gm8878-201ENSMUST00000173552 1725 ntBASIC5.1□□□□□ -1.59
NipblQ6KCD5 Acaca-201ENSMUST00000020843 9026 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Mir5107-201ENSMUST00000175586 88 ntBASIC5.1□□□□□ -1.59
NipblQ6KCD5 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Mir6348-201ENSMUST00000183804 120 ntBASIC5.1□□□□□ -1.59
NipblQ6KCD5 Ighv1-3-201ENSMUST00000192764 302 ntBASIC5.1□□□□□ -1.59
NipblQ6KCD5 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Gm5554-201ENSMUST00000199726 1206 ntBASIC5.1□□□□□ -1.59
NipblQ6KCD5 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NipblQ6KCD5 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC5.1□□□□□ -1.59
NipblQ6KCD5 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Ank3-203ENSMUST00000092431 5823 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Rapgef6-210ENSMUST00000207429 5164 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Gm16025-202ENSMUST00000161923 2425 ntTSL 2 BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Usp45-202ENSMUST00000065111 6003 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NipblQ6KCD5 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC5.1□□□□□ -1.59
NipblQ6KCD5 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Hecw1-201ENSMUST00000110516 9460 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Zkscan2-201ENSMUST00000042470 7831 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Ank2-201ENSMUST00000044443 5775 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Gm6494-201ENSMUST00000218604 2298 ntBASIC5.1□□□□□ -1.59
NipblQ6KCD5 AC163660.4-201ENSMUST00000224983 2171 ntBASIC5.1□□□□□ -1.59
NipblQ6KCD5 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NipblQ6KCD5 Gm15233-201ENSMUST00000118747 400 ntBASIC5.1□□□□□ -1.59
NipblQ6KCD5 Gm12262-201ENSMUST00000119915 305 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms