Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm8648-201ENSMUST00000122457 221 ntBASIC7.85□□□□□ -1.15
Vps54Q5SPW0 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC7.85□□□□□ -1.15
Vps54Q5SPW0 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC7.85□□□□□ -1.15
Vps54Q5SPW0 Gm23674-201ENSMUST00000157473 131 ntBASIC7.85□□□□□ -1.15
Vps54Q5SPW0 Gm26037-201ENSMUST00000158150 311 ntBASIC7.85□□□□□ -1.15
Vps54Q5SPW0 Gm23259-201ENSMUST00000158318 303 ntBASIC7.85□□□□□ -1.15
Vps54Q5SPW0 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Vps54Q5SPW0 Gm43098-201ENSMUST00000199989 1297 ntBASIC7.85□□□□□ -1.15
Vps54Q5SPW0 Gm44538-201ENSMUST00000205615 348 ntBASIC7.85□□□□□ -1.15
Vps54Q5SPW0 Gm8637-201ENSMUST00000212919 1085 ntBASIC7.85□□□□□ -1.15
Vps54Q5SPW0 Gm19340-201ENSMUST00000221995 345 ntBASIC7.85□□□□□ -1.15
Vps54Q5SPW0 AC105324.1-201ENSMUST00000227844 386 ntBASIC7.85□□□□□ -1.15
Vps54Q5SPW0 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Vps54Q5SPW0 Gm6436-201ENSMUST00000077163 451 ntBASIC7.85□□□□□ -1.15
Vps54Q5SPW0 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Vps54Q5SPW0 AC158537.1-201ENSMUST00000224637 1711 ntBASIC7.85□□□□□ -1.15
Vps54Q5SPW0 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Vps54Q5SPW0 AC161884.1-201ENSMUST00000225436 2174 ntBASIC7.85□□□□□ -1.15
Vps54Q5SPW0 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Vps54Q5SPW0 Btk-201ENSMUST00000033617 2540 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Vps54Q5SPW0 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Vps54Q5SPW0 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Vps54Q5SPW0 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Vps54Q5SPW0 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Vps54Q5SPW0 AC122346.1-201ENSMUST00000225266 3732 ntBASIC7.85□□□□□ -1.15
Vps54Q5SPW0 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Vps54Q5SPW0 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC7.84□□□□□ -1.15
Vps54Q5SPW0 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Gm8250-201ENSMUST00000117398 774 ntBASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Gm11920-201ENSMUST00000118491 563 ntBASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Gm12630-201ENSMUST00000121575 784 ntBASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Gm16102-201ENSMUST00000160955 420 ntBASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Gm11107-201ENSMUST00000165414 505 ntBASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Gm18833-201ENSMUST00000173218 862 ntBASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Gm23632-201ENSMUST00000175289 125 ntBASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Mir3473e-201ENSMUST00000183932 110 ntBASIC7.84□□□□□ -1.15
Vps54Q5SPW0 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Gm44361-201ENSMUST00000197960 94 ntBASIC7.84□□□□□ -1.15
Vps54Q5SPW0 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Vps54Q5SPW0 AC154904.1-201ENSMUST00000219510 312 ntBASIC7.84□□□□□ -1.15
Vps54Q5SPW0 CT030254.1-201ENSMUST00000225450 1078 ntBASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Gm6493-201ENSMUST00000159889 1786 ntBASIC7.84□□□□□ -1.15
Vps54Q5SPW0 AC156636.2-201ENSMUST00000218845 4557 ntBASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Vps54Q5SPW0 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
Vps54Q5SPW0 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
Vps54Q5SPW0 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.16
Vps54Q5SPW0 Gm38277-201ENSMUST00000195172 1367 ntBASIC7.84□□□□□ -1.16
Vps54Q5SPW0 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Vps54Q5SPW0 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Vps54Q5SPW0 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC7.83□□□□□ -1.16
Vps54Q5SPW0 AC124421.1-201ENSMUST00000219114 4154 ntBASIC7.83□□□□□ -1.16
Vps54Q5SPW0 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Vps54Q5SPW0 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Vps54Q5SPW0 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
Vps54Q5SPW0 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Vps54Q5SPW0 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Vps54Q5SPW0 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Vps54Q5SPW0 M6pr-ps-201ENSMUST00000120481 830 ntBASIC7.83□□□□□ -1.16
Vps54Q5SPW0 Gm12451-201ENSMUST00000121636 633 ntBASIC7.83□□□□□ -1.16
Vps54Q5SPW0 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC7.83□□□□□ -1.16
Vps54Q5SPW0 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Vps54Q5SPW0 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC7.83□□□□□ -1.16
Vps54Q5SPW0 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC7.83□□□□□ -1.16
Vps54Q5SPW0 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC7.83□□□□□ -1.16
Vps54Q5SPW0 n-R5s109-201ENSMUST00000179195 119 ntBASIC7.83□□□□□ -1.16
Vps54Q5SPW0 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC7.83□□□□□ -1.16
Vps54Q5SPW0 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Vps54Q5SPW0 Gm17908-201ENSMUST00000205552 1256 ntBASIC7.83□□□□□ -1.16
Vps54Q5SPW0 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC7.83□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms