Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm11474-201ENSMUST00000120814 277 ntBASIC13.27□□□□□ -0.29
Trim41Q5NCC3 Gm14366-201ENSMUST00000121970 730 ntBASIC13.27□□□□□ -0.29
Trim41Q5NCC3 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC13.27□□□□□ -0.29
Trim41Q5NCC3 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC13.27□□□□□ -0.29
Trim41Q5NCC3 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC13.27□□□□□ -0.29
Trim41Q5NCC3 Gm38181-201ENSMUST00000181357 720 ntBASIC13.27□□□□□ -0.29
Trim41Q5NCC3 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC13.27□□□□□ -0.29
Trim41Q5NCC3 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC13.27□□□□□ -0.29
Trim41Q5NCC3 Gm37550-201ENSMUST00000193230 463 ntBASIC13.27□□□□□ -0.29
Trim41Q5NCC3 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC13.27□□□□□ -0.29
Trim41Q5NCC3 Gm29950-201ENSMUST00000195273 237 ntBASIC13.27□□□□□ -0.29
Trim41Q5NCC3 Gm5554-201ENSMUST00000199726 1206 ntBASIC13.27□□□□□ -0.29
Trim41Q5NCC3 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Trim41Q5NCC3 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim41Q5NCC3 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Trim41Q5NCC3 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim41Q5NCC3 CT954323.2-201ENSMUST00000222056 213 ntBASIC13.27□□□□□ -0.29
Trim41Q5NCC3 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trim41Q5NCC3 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC13.27□□□□□ -0.29
Trim41Q5NCC3 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trim41Q5NCC3 Wwp1-202ENSMUST00000108246 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim41Q5NCC3 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim41Q5NCC3 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim41Q5NCC3 Nat2-202ENSMUST00000163856 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim41Q5NCC3 Gm44165-201ENSMUST00000203093 1469 ntBASIC13.27□□□□□ -0.29
Trim41Q5NCC3 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim41Q5NCC3 4833420G17Rik-203ENSMUST00000224312 3406 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trim41Q5NCC3 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim41Q5NCC3 Gm37262-201ENSMUST00000192816 1818 ntBASIC13.27□□□□□ -0.29
Trim41Q5NCC3 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC13.27□□□□□ -0.29
Trim41Q5NCC3 Gm38380-201ENSMUST00000195718 2248 ntBASIC13.27□□□□□ -0.29
Trim41Q5NCC3 Ubn2-205ENSMUST00000160583 14644 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim41Q5NCC3 Gm232-201ENSMUST00000216549 2559 ntBASIC13.27□□□□□ -0.29
Trim41Q5NCC3 Paqr7-202ENSMUST00000095074 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim41Q5NCC3 Vmn1r180-201ENSMUST00000173816 5060 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trim41Q5NCC3 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Trim41Q5NCC3 Gm12695-201ENSMUST00000107071 1904 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trim41Q5NCC3 Cacna1d-202ENSMUST00000112250 8688 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim41Q5NCC3 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim41Q5NCC3 Gm10600-201ENSMUST00000117202 2047 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trim41Q5NCC3 Gm15110-201ENSMUST00000117545 881 ntBASIC13.26□□□□□ -0.29
Trim41Q5NCC3 Gm7658-201ENSMUST00000119064 1124 ntBASIC13.26□□□□□ -0.29
Trim41Q5NCC3 Gm15481-201ENSMUST00000120264 539 ntBASIC13.26□□□□□ -0.29
Trim41Q5NCC3 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC13.26□□□□□ -0.29
Trim41Q5NCC3 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC13.26□□□□□ -0.29
Trim41Q5NCC3 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC13.26□□□□□ -0.29
Trim41Q5NCC3 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC13.26□□□□□ -0.29
Trim41Q5NCC3 Gm5445-201ENSMUST00000180224 480 ntBASIC13.26□□□□□ -0.29
Trim41Q5NCC3 6720483E21Rik-201ENSMUST00000181654 1120 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim41Q5NCC3 Mir7674-201ENSMUST00000184964 63 ntBASIC13.26□□□□□ -0.29
Trim41Q5NCC3 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC13.26□□□□□ -0.29
Trim41Q5NCC3 Gm37661-201ENSMUST00000191863 1550 ntBASIC13.26□□□□□ -0.29
Trim41Q5NCC3 Synpo2-207ENSMUST00000198584 9203 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trim41Q5NCC3 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim41Q5NCC3 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC13.26□□□□□ -0.29
Trim41Q5NCC3 Gm18997-201ENSMUST00000216353 822 ntBASIC13.26□□□□□ -0.29
Trim41Q5NCC3 Gm18228-201ENSMUST00000217297 1091 ntBASIC13.26□□□□□ -0.29
Trim41Q5NCC3 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim41Q5NCC3 CT025579.4-201ENSMUST00000224598 627 ntBASIC13.26□□□□□ -0.29
Trim41Q5NCC3 AC154747.4-203ENSMUST00000225893 1384 ntBASIC13.26□□□□□ -0.29
Trim41Q5NCC3 AC154616.2-201ENSMUST00000227978 398 ntBASIC13.26□□□□□ -0.29
Trim41Q5NCC3 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim41Q5NCC3 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trim41Q5NCC3 Gpr50-201ENSMUST00000070449 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim41Q5NCC3 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trim41Q5NCC3 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim41Q5NCC3 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trim41Q5NCC3 Eif4g2-213ENSMUST00000162415 7995 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim41Q5NCC3 Atf6-201ENSMUST00000027974 7246 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim41Q5NCC3 Nutm1-201ENSMUST00000043970 3731 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim41Q5NCC3 Ccdc114-203ENSMUST00000210602 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim41Q5NCC3 Gm11412-201ENSMUST00000144875 2800 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim41Q5NCC3 Gm43080-201ENSMUST00000199006 2643 ntBASIC13.26□□□□□ -0.29
Trim41Q5NCC3 Thada-201ENSMUST00000047524 7884 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim41Q5NCC3 Gm6313-202ENSMUST00000150112 2562 ntTSL 2 BASIC13.26□□□□□ -0.29
Trim41Q5NCC3 Wdr44-202ENSMUST00000101670 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim41Q5NCC3 Osbpl6-203ENSMUST00000111930 3853 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim41Q5NCC3 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim41Q5NCC3 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC13.25□□□□□ -0.29
Trim41Q5NCC3 Myom1-202ENSMUST00000073211 5602 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim41Q5NCC3 Olfr523-202ENSMUST00000209314 3677 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trim41Q5NCC3 AC154323.3-201ENSMUST00000226927 1660 ntBASIC13.25□□□□□ -0.29
Trim41Q5NCC3 Slc38a2-201ENSMUST00000023099 4626 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim41Q5NCC3 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trim41Q5NCC3 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim41Q5NCC3 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC13.25□□□□□ -0.29
Trim41Q5NCC3 Gm37150-201ENSMUST00000193900 2754 ntBASIC13.25□□□□□ -0.29
Trim41Q5NCC3 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trim41Q5NCC3 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC13.25□□□□□ -0.29
Trim41Q5NCC3 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC13.25□□□□□ -0.29
Trim41Q5NCC3 Gm14979-201ENSMUST00000121561 1035 ntBASIC13.25□□□□□ -0.29
Trim41Q5NCC3 Gm15644-201ENSMUST00000121764 387 ntBASIC13.25□□□□□ -0.29
Trim41Q5NCC3 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim41Q5NCC3 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim41Q5NCC3 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim41Q5NCC3 Gm24773-201ENSMUST00000158513 99 ntBASIC13.25□□□□□ -0.29
Trim41Q5NCC3 Gm22533-201ENSMUST00000158821 274 ntBASIC13.25□□□□□ -0.29
Trim41Q5NCC3 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Trim41Q5NCC3 Gm27905-201ENSMUST00000184005 207 ntBASIC13.25□□□□□ -0.29
Trim41Q5NCC3 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms