Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm8454-201ENSMUST00000196980 811 ntBASIC6.55□□□□□ -1.36
Trafd1Q3UDK1 Gm5711-201ENSMUST00000197896 421 ntBASIC6.55□□□□□ -1.36
Trafd1Q3UDK1 Gm4870-201ENSMUST00000198525 1251 ntBASIC6.55□□□□□ -1.36
Trafd1Q3UDK1 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC6.55□□□□□ -1.36
Trafd1Q3UDK1 Gm7463-201ENSMUST00000201541 547 ntBASIC6.55□□□□□ -1.36
Trafd1Q3UDK1 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Trafd1Q3UDK1 Gm44984-201ENSMUST00000207802 394 ntBASIC6.55□□□□□ -1.36
Trafd1Q3UDK1 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trafd1Q3UDK1 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trafd1Q3UDK1 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trafd1Q3UDK1 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC6.55□□□□□ -1.36
Trafd1Q3UDK1 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC6.55□□□□□ -1.36
Trafd1Q3UDK1 AC154558.1-201ENSMUST00000222278 415 ntBASIC6.55□□□□□ -1.36
Trafd1Q3UDK1 AC123533.2-201ENSMUST00000228176 375 ntBASIC6.55□□□□□ -1.36
Trafd1Q3UDK1 AC154618.2-201ENSMUST00000228299 452 ntBASIC6.55□□□□□ -1.36
Trafd1Q3UDK1 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Trafd1Q3UDK1 Gm24036-201ENSMUST00000082868 156 ntBASIC6.55□□□□□ -1.36
Trafd1Q3UDK1 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trafd1Q3UDK1 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trafd1Q3UDK1 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Trafd1Q3UDK1 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trafd1Q3UDK1 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trafd1Q3UDK1 Gm18451-201ENSMUST00000196759 1719 ntBASIC6.55□□□□□ -1.36
Trafd1Q3UDK1 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Trafd1Q3UDK1 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC6.55□□□□□ -1.36
Trafd1Q3UDK1 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Trafd1Q3UDK1 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC6.55□□□□□ -1.36
Trafd1Q3UDK1 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trafd1Q3UDK1 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trafd1Q3UDK1 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm6327-201ENSMUST00000171185 1335 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 AC098728.1-202ENSMUST00000226656 2198 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm24173-201ENSMUST00000104130 128 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm12874-201ENSMUST00000117190 913 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm11858-201ENSMUST00000117935 838 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm13604-201ENSMUST00000119332 482 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm4997-201ENSMUST00000154056 360 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm24735-201ENSMUST00000158859 118 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm28739-201ENSMUST00000185415 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm28219-201ENSMUST00000185452 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm28542-201ENSMUST00000185545 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm28303-201ENSMUST00000185642 747 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm29244-201ENSMUST00000185825 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm29437-201ENSMUST00000185865 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm29412-201ENSMUST00000185869 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm28910-201ENSMUST00000185921 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm28812-201ENSMUST00000185963 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm29468-201ENSMUST00000185978 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm28335-201ENSMUST00000186204 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm28854-201ENSMUST00000186218 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm28636-201ENSMUST00000186353 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm28452-201ENSMUST00000186623 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm29298-201ENSMUST00000186704 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm28185-201ENSMUST00000186815 694 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm28227-201ENSMUST00000186862 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm28796-201ENSMUST00000186905 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm29659-201ENSMUST00000187063 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm28473-201ENSMUST00000187325 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm28558-201ENSMUST00000187373 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm28682-201ENSMUST00000187430 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm28738-201ENSMUST00000187480 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm28949-201ENSMUST00000187805 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm28773-201ENSMUST00000187925 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm29319-201ENSMUST00000188060 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm29422-201ENSMUST00000188062 694 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm28734-201ENSMUST00000188104 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm28787-201ENSMUST00000188357 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm29312-201ENSMUST00000188724 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm29451-201ENSMUST00000188862 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm29637-201ENSMUST00000188877 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm29033-201ENSMUST00000189114 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm29614-201ENSMUST00000189263 694 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm28751-201ENSMUST00000189287 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm29559-201ENSMUST00000189412 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm28272-201ENSMUST00000189512 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm28483-201ENSMUST00000189519 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm28123-201ENSMUST00000189725 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm28368-201ENSMUST00000189804 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm29119-201ENSMUST00000189973 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm28716-201ENSMUST00000190217 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm29239-201ENSMUST00000190304 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm28837-201ENSMUST00000190397 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm28968-201ENSMUST00000190413 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm28531-201ENSMUST00000190529 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm28165-201ENSMUST00000190669 694 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm29181-201ENSMUST00000191288 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm38229-201ENSMUST00000191931 696 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms