Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Ccbe1Q3MI99 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Ccbe1Q3MI99 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC6.44□□□□□ -1.38
Ccbe1Q3MI99 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Ccbe1Q3MI99 Gm37470-201ENSMUST00000193378 2798 ntBASIC6.44□□□□□ -1.38
Ccbe1Q3MI99 Gm17083-201ENSMUST00000165849 1366 ntBASIC6.44□□□□□ -1.38
Ccbe1Q3MI99 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Ccbe1Q3MI99 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Ccbe1Q3MI99 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Ccbe1Q3MI99 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Gm15624-201ENSMUST00000145420 1405 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Parp11-203ENSMUST00000112193 1725 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Gm7091-201ENSMUST00000116438 586 ntBASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Gm8802-201ENSMUST00000118633 740 ntBASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Gm15753-201ENSMUST00000119241 1062 ntBASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Gm13683-201ENSMUST00000119497 1076 ntBASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Gm12599-201ENSMUST00000120534 792 ntBASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Hmgn2-ps1-201ENSMUST00000120716 279 ntBASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Defa-ps3-201ENSMUST00000142705 282 ntBASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 1700034H15Rik-205ENSMUST00000154116 926 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Gm24239-201ENSMUST00000157791 255 ntBASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Gm26401-201ENSMUST00000158502 76 ntBASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Gm23777-201ENSMUST00000158994 259 ntBASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Gm7707-201ENSMUST00000165950 1156 ntBASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Gm17233-201ENSMUST00000168470 698 ntTSL 3 BASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Gm4246-201ENSMUST00000172822 216 ntBASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Gm10182-201ENSMUST00000178676 273 ntBASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Gm18353-201ENSMUST00000185906 784 ntBASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Gm28466-201ENSMUST00000190678 659 ntBASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Ly6c2-204ENSMUST00000191451 538 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Ighv1-38-201ENSMUST00000192755 349 ntBASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Gm43160-201ENSMUST00000196453 421 ntBASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Gm6394-201ENSMUST00000197077 477 ntBASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Gm43708-201ENSMUST00000198857 961 ntBASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Gm42673-201ENSMUST00000202676 337 ntBASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Gm44431-201ENSMUST00000203500 413 ntBASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Gm31663-202ENSMUST00000208481 1190 ntBASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Gm5535-206ENSMUST00000210067 679 ntTSL 5 BASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Rnf212-206ENSMUST00000212212 924 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 AC155644.1-201ENSMUST00000218527 890 ntTSL 5 BASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Gm5655-201ENSMUST00000221078 901 ntBASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 AC125019.1-201ENSMUST00000224809 908 ntBASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 AC107452.2-201ENSMUST00000228415 363 ntBASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 AC131586.4-201ENSMUST00000228424 668 ntBASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 AC137950.1-201ENSMUST00000228553 515 ntBASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Wdr66-201ENSMUST00000069311 978 ntTSL 5 BASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Gm43062-201ENSMUST00000196302 1319 ntBASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Ccbe1Q3MI99 C87977-202ENSMUST00000105754 1407 ntAPPRIS ALT2 TSL 3 BASIC6.42□□□□□ -1.38
Ccbe1Q3MI99 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Ccbe1Q3MI99 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Ccbe1Q3MI99 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ccbe1Q3MI99 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Ccbe1Q3MI99 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Ccbe1Q3MI99 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC6.42□□□□□ -1.38
Ccbe1Q3MI99 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Ccbe1Q3MI99 Gm43623-201ENSMUST00000199289 2663 ntBASIC6.42□□□□□ -1.38
Ccbe1Q3MI99 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Ccbe1Q3MI99 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Ccbe1Q3MI99 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC6.42□□□□□ -1.38
Ccbe1Q3MI99 Gm14510-201ENSMUST00000116165 1092 ntBASIC6.42□□□□□ -1.38
Ccbe1Q3MI99 Gm14584-201ENSMUST00000118956 637 ntBASIC6.42□□□□□ -1.38
Ccbe1Q3MI99 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
Ccbe1Q3MI99 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC6.42□□□□□ -1.38
Ccbe1Q3MI99 Gm12731-201ENSMUST00000120932 268 ntBASIC6.42□□□□□ -1.38
Ccbe1Q3MI99 Gm11933-201ENSMUST00000121550 375 ntBASIC6.42□□□□□ -1.38
Ccbe1Q3MI99 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ccbe1Q3MI99 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC6.42□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 98.3 ms