Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 AC154257.1-201ENSMUST00000224811 1525 ntBASIC8.43□□□□□ -1.06
Msh6P54276 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Msh6P54276 Gm45250-201ENSMUST00000209414 3592 ntBASIC8.43□□□□□ -1.06
Msh6P54276 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Msh6P54276 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Msh6P54276 Gm43176-201ENSMUST00000199653 2989 ntBASIC8.42□□□□□ -1.06
Msh6P54276 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC8.42□□□□□ -1.06
Msh6P54276 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Msh6P54276 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Msh6P54276 Gm16204-201ENSMUST00000117864 1897 ntBASIC8.42□□□□□ -1.06
Msh6P54276 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Msh6P54276 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
Msh6P54276 Gm42685-201ENSMUST00000200378 2390 ntBASIC8.42□□□□□ -1.06
Msh6P54276 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Msh6P54276 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Msh6P54276 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Msh6P54276 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Msh6P54276 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Msh6P54276 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Msh6P54276 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Msh6P54276 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC8.42□□□□□ -1.06
Msh6P54276 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Msh6P54276 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Msh6P54276 Gm12181-201ENSMUST00000121448 531 ntBASIC8.42□□□□□ -1.06
Msh6P54276 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC8.42□□□□□ -1.06
Msh6P54276 Gm27854-201ENSMUST00000175578 244 ntBASIC8.42□□□□□ -1.06
Msh6P54276 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC8.42□□□□□ -1.06
Msh6P54276 Gm29197-201ENSMUST00000185922 702 ntBASIC8.42□□□□□ -1.06
Msh6P54276 Gm6693-201ENSMUST00000189583 813 ntBASIC8.42□□□□□ -1.06
Msh6P54276 Gm44221-201ENSMUST00000203552 388 ntBASIC8.42□□□□□ -1.06
Msh6P54276 Gm19195-201ENSMUST00000222018 511 ntBASIC8.42□□□□□ -1.06
Msh6P54276 AC154861.1-201ENSMUST00000223767 800 ntBASIC8.42□□□□□ -1.06
Msh6P54276 AV026068-216ENSMUST00000223874 328 ntBASIC8.42□□□□□ -1.06
Msh6P54276 AV026068-218ENSMUST00000223980 575 ntBASIC8.42□□□□□ -1.06
Msh6P54276 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Msh6P54276 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Msh6P54276 n-R5s58-201ENSMUST00000093682 119 ntBASIC8.42□□□□□ -1.06
Msh6P54276 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Msh6P54276 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Msh6P54276 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
Msh6P54276 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Msh6P54276 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Msh6P54276 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC8.42□□□□□ -1.06
Msh6P54276 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC8.42□□□□□ -1.06
Msh6P54276 Btk-201ENSMUST00000033617 2540 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Msh6P54276 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Msh6P54276 Gm38178-201ENSMUST00000194502 2471 ntBASIC8.42□□□□□ -1.06
Msh6P54276 Gm37653-201ENSMUST00000195401 3578 ntBASIC8.42□□□□□ -1.06
Msh6P54276 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Msh6P54276 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Msh6P54276 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Msh6P54276 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
Msh6P54276 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Msh6P54276 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Msh6P54276 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Msh6P54276 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Msh6P54276 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Msh6P54276 AC153143.1-201ENSMUST00000222966 1340 ntBASIC8.41□□□□□ -1.06
Msh6P54276 Gm38366-201ENSMUST00000193127 1934 ntBASIC8.41□□□□□ -1.06
Msh6P54276 Arhgef9-209ENSMUST00000181987 6222 ntTSL 2 BASIC8.41□□□□□ -1.06
Msh6P54276 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Msh6P54276 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Msh6P54276 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Msh6P54276 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Msh6P54276 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC8.41□□□□□ -1.06
Msh6P54276 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Msh6P54276 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC8.41□□□□□ -1.06
Msh6P54276 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Msh6P54276 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Msh6P54276 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Msh6P54276 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC8.41□□□□□ -1.06
Msh6P54276 AC174797.5-201ENSMUST00000225055 1860 ntBASIC8.41□□□□□ -1.06
Msh6P54276 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Msh6P54276 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Msh6P54276 Gm12262-201ENSMUST00000119915 305 ntBASIC8.41□□□□□ -1.06
Msh6P54276 Gm15194-201ENSMUST00000120453 434 ntBASIC8.41□□□□□ -1.06
Msh6P54276 Gm23031-201ENSMUST00000157998 119 ntBASIC8.41□□□□□ -1.06
Msh6P54276 Mir7220-201ENSMUST00000183978 60 ntBASIC8.41□□□□□ -1.06
Msh6P54276 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC8.41□□□□□ -1.06
Msh6P54276 Gm18849-201ENSMUST00000189861 560 ntBASIC8.41□□□□□ -1.06
Msh6P54276 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC8.41□□□□□ -1.06
Msh6P54276 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC8.41□□□□□ -1.06
Msh6P54276 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC8.41□□□□□ -1.06
Msh6P54276 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
Msh6P54276 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Msh6P54276 AC159205.4-201ENSMUST00000225964 704 ntBASIC8.41□□□□□ -1.06
Msh6P54276 AC140288.1-201ENSMUST00000226329 503 ntBASIC8.41□□□□□ -1.06
Msh6P54276 AC113125.2-201ENSMUST00000226837 362 ntBASIC8.41□□□□□ -1.06
Msh6P54276 AC139197.1-201ENSMUST00000228332 813 ntBASIC8.41□□□□□ -1.06
Msh6P54276 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Msh6P54276 Gm8526-201ENSMUST00000079153 475 ntBASIC8.41□□□□□ -1.06
Msh6P54276 Gm15732-201ENSMUST00000079794 480 ntBASIC8.41□□□□□ -1.06
Msh6P54276 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Msh6P54276 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Msh6P54276 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
Msh6P54276 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Msh6P54276 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Msh6P54276 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Msh6P54276 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Msh6P54276 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC8.41□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 106.1 ms