Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Chd1P40201 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Chd1P40201 Myh4-202ENSMUST00000170942 5912 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Chd1P40201 Klf12-205ENSMUST00000228216 5890 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Chd1P40201 Pappa2-202ENSMUST00000159861 9518 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Chd1P40201 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Chd1P40201 Hivep2-205ENSMUST00000191138 9846 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Chd1P40201 Gm22272-201ENSMUST00000104039 134 ntBASIC9.77□□□□□ -0.85
Chd1P40201 Gm8855-201ENSMUST00000118888 878 ntBASIC9.77□□□□□ -0.85
Chd1P40201 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC9.77□□□□□ -0.85
Chd1P40201 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Chd1P40201 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC9.77□□□□□ -0.85
Chd1P40201 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Chd1P40201 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Chd1P40201 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Chd1P40201 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.85
Chd1P40201 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Chd1P40201 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC9.77□□□□□ -0.85
Chd1P40201 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC9.77□□□□□ -0.85
Chd1P40201 Ptprb-201ENSMUST00000092167 11911 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Chd1P40201 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Chd1P40201 Thrb-201ENSMUST00000022303 4532 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Chd1P40201 Cmtr1-201ENSMUST00000024816 6380 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Chd1P40201 Abhd2-201ENSMUST00000037315 6877 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Chd1P40201 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Chd1P40201 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Chd1P40201 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Chd1P40201 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC9.76□□□□□ -0.85
Chd1P40201 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Chd1P40201 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Chd1P40201 Gm15000-201ENSMUST00000118275 1243 ntBASIC9.76□□□□□ -0.85
Chd1P40201 Gm12734-201ENSMUST00000120228 948 ntBASIC9.76□□□□□ -0.85
Chd1P40201 Gm15237-201ENSMUST00000122104 469 ntBASIC9.76□□□□□ -0.85
Chd1P40201 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Chd1P40201 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Chd1P40201 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Chd1P40201 Gm25487-201ENSMUST00000158725 125 ntBASIC9.76□□□□□ -0.85
Chd1P40201 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Chd1P40201 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Chd1P40201 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Chd1P40201 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC9.76□□□□□ -0.85
Chd1P40201 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC9.76□□□□□ -0.85
Chd1P40201 CT030254.1-201ENSMUST00000225450 1078 ntBASIC9.76□□□□□ -0.85
Chd1P40201 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC9.76□□□□□ -0.85
Chd1P40201 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Chd1P40201 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Chd1P40201 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Chd1P40201 Gm43292-201ENSMUST00000199580 2449 ntBASIC9.76□□□□□ -0.85
Chd1P40201 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
Chd1P40201 Wdr37-201ENSMUST00000021572 4526 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Chd1P40201 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC9.76□□□□□ -0.85
Chd1P40201 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Chd1P40201 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC9.76□□□□□ -0.85
Chd1P40201 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Chd1P40201 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Chd1P40201 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Chd1P40201 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Chd1P40201 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Chd1P40201 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Chd1P40201 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC9.76□□□□□ -0.85
Chd1P40201 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC9.76□□□□□ -0.85
Chd1P40201 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC9.76□□□□□ -0.85
Chd1P40201 Gm43222-201ENSMUST00000199013 603 ntBASIC9.76□□□□□ -0.85
Chd1P40201 Gm19900-201ENSMUST00000207285 576 ntBASIC9.76□□□□□ -0.85
Chd1P40201 Gm33242-201ENSMUST00000212130 1057 ntBASIC9.76□□□□□ -0.85
Chd1P40201 Gm18996-201ENSMUST00000214851 755 ntBASIC9.76□□□□□ -0.85
Chd1P40201 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC9.76□□□□□ -0.85
Chd1P40201 AC163664.2-201ENSMUST00000228894 459 ntBASIC9.76□□□□□ -0.85
Chd1P40201 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Chd1P40201 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC9.76□□□□□ -0.85
Chd1P40201 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Chd1P40201 Tiam1-201ENSMUST00000002588 7290 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Chd1P40201 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Chd1P40201 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Chd1P40201 Wdr72-201ENSMUST00000055879 5196 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Chd1P40201 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Chd1P40201 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Chd1P40201 Add2-209ENSMUST00000204059 8182 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Chd1P40201 Ttc26-205ENSMUST00000162554 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Chd1P40201 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Chd1P40201 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Chd1P40201 Fmr1-202ENSMUST00000114653 4058 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Chd1P40201 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Chd1P40201 Fbxl20-201ENSMUST00000103143 8601 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Chd1P40201 Cacna1c-222ENSMUST00000190285 6585 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Chd1P40201 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Chd1P40201 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Chd1P40201 Odf2-206ENSMUST00000113759 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Chd1P40201 Gm16060-201ENSMUST00000153140 478 ntBASIC9.75□□□□□ -0.85
Chd1P40201 Gm25439-201ENSMUST00000158280 131 ntBASIC9.75□□□□□ -0.85
Chd1P40201 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC9.75□□□□□ -0.85
Chd1P40201 Gm27970-201ENSMUST00000184854 407 ntBASIC9.75□□□□□ -0.85
Chd1P40201 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Chd1P40201 Mrgpra14-201ENSMUST00000189782 913 ntBASIC9.75□□□□□ -0.85
Chd1P40201 Gm23011-202ENSMUST00000197855 275 ntBASIC9.75□□□□□ -0.85
Chd1P40201 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC9.75□□□□□ -0.85
Chd1P40201 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC9.75□□□□□ -0.85
Chd1P40201 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC9.75□□□□□ -0.85
Chd1P40201 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Chd1P40201 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms