Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Traf1P39428 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Traf1P39428 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC7.8□□□□□ -1.16
Traf1P39428 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Traf1P39428 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Traf1P39428 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Traf1P39428 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Traf1P39428 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Traf1P39428 Gm11445-201ENSMUST00000119101 532 ntBASIC7.8□□□□□ -1.16
Traf1P39428 Gm12447-201ENSMUST00000119110 470 ntBASIC7.8□□□□□ -1.16
Traf1P39428 Gm13357-201ENSMUST00000120528 537 ntBASIC7.8□□□□□ -1.16
Traf1P39428 Gm7494-201ENSMUST00000121248 441 ntBASIC7.8□□□□□ -1.16
Traf1P39428 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Traf1P39428 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Traf1P39428 Gm3326-201ENSMUST00000164656 1043 ntBASIC7.8□□□□□ -1.16
Traf1P39428 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Traf1P39428 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Traf1P39428 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Traf1P39428 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Traf1P39428 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Traf1P39428 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC7.8□□□□□ -1.16
Traf1P39428 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC7.8□□□□□ -1.16
Traf1P39428 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC7.8□□□□□ -1.16
Traf1P39428 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC7.8□□□□□ -1.16
Traf1P39428 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC7.8□□□□□ -1.16
Traf1P39428 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC7.8□□□□□ -1.16
Traf1P39428 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC7.8□□□□□ -1.16
Traf1P39428 Gm45739-201ENSMUST00000213094 388 ntBASIC7.8□□□□□ -1.16
Traf1P39428 Gm18914-201ENSMUST00000214625 616 ntBASIC7.8□□□□□ -1.16
Traf1P39428 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Traf1P39428 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Traf1P39428 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Traf1P39428 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC7.8□□□□□ -1.16
Traf1P39428 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
Traf1P39428 Gm45516-201ENSMUST00000211588 4182 ntBASIC7.8□□□□□ -1.16
Traf1P39428 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Traf1P39428 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Traf1P39428 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Traf1P39428 Gm37107-201ENSMUST00000195326 2552 ntBASIC7.8□□□□□ -1.16
Traf1P39428 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Traf1P39428 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Traf1P39428 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Traf1P39428 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Traf1P39428 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC7.79□□□□□ -1.16
Traf1P39428 Gm31049-201ENSMUST00000201516 1302 ntBASIC7.79□□□□□ -1.16
Traf1P39428 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Traf1P39428 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Traf1P39428 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Traf1P39428 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC7.79□□□□□ -1.16
Traf1P39428 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC7.79□□□□□ -1.16
Traf1P39428 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC7.79□□□□□ -1.16
Traf1P39428 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Traf1P39428 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Traf1P39428 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Traf1P39428 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC7.79□□□□□ -1.16
Traf1P39428 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC7.79□□□□□ -1.16
Traf1P39428 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Traf1P39428 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Traf1P39428 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Traf1P39428 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Traf1P39428 Gm23485-201ENSMUST00000104181 155 ntBASIC7.79□□□□□ -1.16
Traf1P39428 Gm24888-201ENSMUST00000104387 130 ntBASIC7.79□□□□□ -1.16
Traf1P39428 Gm7113-201ENSMUST00000120477 958 ntBASIC7.79□□□□□ -1.16
Traf1P39428 Gm11472-201ENSMUST00000121305 556 ntBASIC7.79□□□□□ -1.16
Traf1P39428 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Traf1P39428 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC7.79□□□□□ -1.16
Traf1P39428 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC7.79□□□□□ -1.16
Traf1P39428 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC7.79□□□□□ -1.16
Traf1P39428 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Traf1P39428 Gm25244-201ENSMUST00000178089 132 ntBASIC7.79□□□□□ -1.16
Traf1P39428 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Traf1P39428 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Traf1P39428 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC7.79□□□□□ -1.16
Traf1P39428 Gm8920-201ENSMUST00000196153 924 ntBASIC7.79□□□□□ -1.16
Traf1P39428 Gm44374-201ENSMUST00000199821 140 ntBASIC7.79□□□□□ -1.16
Traf1P39428 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Traf1P39428 Gm17908-201ENSMUST00000205552 1256 ntBASIC7.79□□□□□ -1.16
Traf1P39428 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC7.79□□□□□ -1.16
Traf1P39428 Gm45899-201ENSMUST00000212196 1276 ntBASIC7.79□□□□□ -1.16
Traf1P39428 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Traf1P39428 Gm8607-201ENSMUST00000221864 431 ntBASIC7.79□□□□□ -1.16
Traf1P39428 AC174082.2-201ENSMUST00000222094 543 ntBASIC7.79□□□□□ -1.16
Traf1P39428 A1cf-203ENSMUST00000224400 1204 ntBASIC7.79□□□□□ -1.16
Traf1P39428 AC159267.1-201ENSMUST00000226702 678 ntBASIC7.79□□□□□ -1.16
Traf1P39428 AC132833.4-201ENSMUST00000228313 203 ntBASIC7.79□□□□□ -1.16
Traf1P39428 AC135086.1-201ENSMUST00000228621 817 ntBASIC7.79□□□□□ -1.16
Traf1P39428 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Traf1P39428 AC153143.2-201ENSMUST00000220999 1804 ntBASIC7.79□□□□□ -1.16
Traf1P39428 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Traf1P39428 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Traf1P39428 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Traf1P39428 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Traf1P39428 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Traf1P39428 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Traf1P39428 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
Traf1P39428 Gm33167-201ENSMUST00000201933 2643 ntBASIC7.79□□□□□ -1.16
Traf1P39428 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Traf1P39428 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC7.78□□□□□ -1.16
Traf1P39428 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Traf1P39428 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms