Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LdlrP35951 Gm24228-201ENSMUST00000158829 129 ntBASIC6.81□□□□□ -1.32
LdlrP35951 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC6.81□□□□□ -1.32
LdlrP35951 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC6.81□□□□□ -1.32
LdlrP35951 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC6.81□□□□□ -1.32
LdlrP35951 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
LdlrP35951 Mir6989-201ENSMUST00000184812 65 ntBASIC6.81□□□□□ -1.32
LdlrP35951 Gm38200-201ENSMUST00000192083 2111 ntBASIC6.81□□□□□ -1.32
LdlrP35951 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
LdlrP35951 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC6.81□□□□□ -1.32
LdlrP35951 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC6.81□□□□□ -1.32
LdlrP35951 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC6.81□□□□□ -1.32
LdlrP35951 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC6.81□□□□□ -1.32
LdlrP35951 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC6.81□□□□□ -1.32
LdlrP35951 Gm9472-201ENSMUST00000221625 526 ntBASIC6.81□□□□□ -1.32
LdlrP35951 Pdilt-201ENSMUST00000033267 2146 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LdlrP35951 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LdlrP35951 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
LdlrP35951 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LdlrP35951 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LdlrP35951 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
LdlrP35951 AC117608.1-201ENSMUST00000225500 3418 ntBASIC6.81□□□□□ -1.32
LdlrP35951 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
LdlrP35951 AC129308.2-203ENSMUST00000224109 2385 ntBASIC6.81□□□□□ -1.32
LdlrP35951 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
LdlrP35951 Gm18830-201ENSMUST00000199036 1396 ntBASIC6.81□□□□□ -1.32
LdlrP35951 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
LdlrP35951 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LdlrP35951 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
LdlrP35951 AL450321.1-201ENSMUST00000220600 3550 ntBASIC6.8□□□□□ -1.32
LdlrP35951 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
LdlrP35951 Gm44093-201ENSMUST00000204381 1802 ntBASIC6.8□□□□□ -1.32
LdlrP35951 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC6.8□□□□□ -1.32
LdlrP35951 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC6.8□□□□□ -1.32
LdlrP35951 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
LdlrP35951 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
LdlrP35951 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
LdlrP35951 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
LdlrP35951 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
LdlrP35951 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
LdlrP35951 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
LdlrP35951 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
LdlrP35951 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
LdlrP35951 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
LdlrP35951 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
LdlrP35951 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
LdlrP35951 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC6.8□□□□□ -1.32
LdlrP35951 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
LdlrP35951 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
LdlrP35951 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
LdlrP35951 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
LdlrP35951 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
LdlrP35951 Mir697-201ENSMUST00000102316 109 ntBASIC6.8□□□□□ -1.32
LdlrP35951 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
LdlrP35951 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
LdlrP35951 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
LdlrP35951 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
LdlrP35951 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC6.8□□□□□ -1.32
LdlrP35951 Gm12635-201ENSMUST00000117285 752 ntBASIC6.8□□□□□ -1.32
LdlrP35951 Gm14727-201ENSMUST00000118526 525 ntBASIC6.8□□□□□ -1.32
LdlrP35951 Gm12804-201ENSMUST00000121030 999 ntBASIC6.8□□□□□ -1.32
LdlrP35951 Gm14721-201ENSMUST00000121381 525 ntBASIC6.8□□□□□ -1.32
LdlrP35951 Gm15538-201ENSMUST00000121410 313 ntBASIC6.8□□□□□ -1.32
LdlrP35951 Gm25047-201ENSMUST00000122667 104 ntBASIC6.8□□□□□ -1.32
LdlrP35951 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC6.8□□□□□ -1.32
LdlrP35951 Gm14503-201ENSMUST00000130337 1164 ntBASIC6.8□□□□□ -1.32
LdlrP35951 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC6.8□□□□□ -1.32
LdlrP35951 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC6.8□□□□□ -1.32
LdlrP35951 Gm24157-201ENSMUST00000175265 111 ntBASIC6.8□□□□□ -1.32
LdlrP35951 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC6.8□□□□□ -1.32
LdlrP35951 Gm4373-201ENSMUST00000178571 556 ntBASIC6.8□□□□□ -1.32
LdlrP35951 Gm4956-202ENSMUST00000178869 672 ntBASIC6.8□□□□□ -1.32
LdlrP35951 Gm19480-201ENSMUST00000185547 667 ntBASIC6.8□□□□□ -1.32
LdlrP35951 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
LdlrP35951 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC6.8□□□□□ -1.32
LdlrP35951 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
LdlrP35951 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
LdlrP35951 Gm19086-201ENSMUST00000190772 665 ntBASIC6.8□□□□□ -1.32
LdlrP35951 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC6.8□□□□□ -1.32
LdlrP35951 Gm37383-201ENSMUST00000191750 745 ntBASIC6.8□□□□□ -1.32
LdlrP35951 Gm37518-201ENSMUST00000194930 2603 ntBASIC6.8□□□□□ -1.32
LdlrP35951 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC6.8□□□□□ -1.32
LdlrP35951 Gm43189-201ENSMUST00000196040 3069 ntBASIC6.8□□□□□ -1.32
LdlrP35951 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC6.8□□□□□ -1.32
LdlrP35951 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC6.8□□□□□ -1.32
LdlrP35951 Gm3549-201ENSMUST00000203873 794 ntBASIC6.8□□□□□ -1.32
LdlrP35951 Gm44856-201ENSMUST00000206639 304 ntBASIC6.8□□□□□ -1.32
LdlrP35951 Gm44869-201ENSMUST00000208836 357 ntBASIC6.8□□□□□ -1.32
LdlrP35951 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC6.8□□□□□ -1.32
LdlrP35951 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC6.8□□□□□ -1.32
LdlrP35951 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC6.8□□□□□ -1.32
LdlrP35951 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC6.8□□□□□ -1.32
LdlrP35951 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC6.8□□□□□ -1.32
LdlrP35951 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
LdlrP35951 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
LdlrP35951 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
LdlrP35951 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
LdlrP35951 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
LdlrP35951 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
LdlrP35951 Gm22504-201ENSMUST00000082963 139 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms