Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 AC131654.1-201ENSMUST00000219675 745 ntBASIC6.59□□□□□ -1.35
Lire1P11260 AC122539.1-201ENSMUST00000219925 329 ntBASIC6.59□□□□□ -1.35
Lire1P11260 AC164424.3-201ENSMUST00000220809 148 ntBASIC6.59□□□□□ -1.35
Lire1P11260 AC166358.8-201ENSMUST00000223288 105 ntBASIC6.59□□□□□ -1.35
Lire1P11260 AC124739.1-201ENSMUST00000223433 148 ntBASIC6.59□□□□□ -1.35
Lire1P11260 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Lire1P11260 AC069562.1-201ENSMUST00000224206 434 ntBASIC6.59□□□□□ -1.35
Lire1P11260 CT009527.2-201ENSMUST00000225386 606 ntBASIC6.59□□□□□ -1.35
Lire1P11260 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Lire1P11260 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Lire1P11260 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Lire1P11260 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Lire1P11260 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Lire1P11260 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Lire1P11260 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Lire1P11260 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Lire1P11260 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Lire1P11260 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC6.59□□□□□ -1.35
Lire1P11260 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Lire1P11260 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC6.59□□□□□ -1.35
Lire1P11260 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Lire1P11260 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Lire1P11260 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Lire1P11260 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC6.59□□□□□ -1.36
Lire1P11260 Gm43319-201ENSMUST00000198036 2270 ntBASIC6.59□□□□□ -1.36
Lire1P11260 Gm7155-201ENSMUST00000121143 1671 ntBASIC6.58□□□□□ -1.36
Lire1P11260 Gm38380-201ENSMUST00000195718 2248 ntBASIC6.58□□□□□ -1.36
Lire1P11260 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Lire1P11260 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Lire1P11260 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Lire1P11260 Gm42513-201ENSMUST00000197831 2119 ntBASIC6.58□□□□□ -1.36
Lire1P11260 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Lire1P11260 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Lire1P11260 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC6.58□□□□□ -1.36
Lire1P11260 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Lire1P11260 Fate1-202ENSMUST00000114569 1053 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Lire1P11260 Gm13414-201ENSMUST00000117516 727 ntBASIC6.58□□□□□ -1.36
Lire1P11260 Gm16056-201ENSMUST00000119293 135 ntBASIC6.58□□□□□ -1.36
Lire1P11260 Gm11689-201ENSMUST00000120766 302 ntBASIC6.58□□□□□ -1.36
Lire1P11260 Gm16102-201ENSMUST00000160955 420 ntBASIC6.58□□□□□ -1.36
Lire1P11260 Gm7420-201ENSMUST00000162836 842 ntBASIC6.58□□□□□ -1.36
Lire1P11260 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC6.58□□□□□ -1.36
Lire1P11260 Mir6908-201ENSMUST00000184056 63 ntBASIC6.58□□□□□ -1.36
Lire1P11260 Gm18802-201ENSMUST00000186270 888 ntBASIC6.58□□□□□ -1.36
Lire1P11260 Gm21139-201ENSMUST00000186594 877 ntBASIC6.58□□□□□ -1.36
Lire1P11260 Gm29383-201ENSMUST00000188284 480 ntBASIC6.58□□□□□ -1.36
Lire1P11260 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Lire1P11260 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC6.58□□□□□ -1.36
Lire1P11260 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC6.58□□□□□ -1.36
Lire1P11260 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC6.58□□□□□ -1.36
Lire1P11260 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Lire1P11260 Gm8539-201ENSMUST00000199822 501 ntBASIC6.58□□□□□ -1.36
Lire1P11260 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC6.58□□□□□ -1.36
Lire1P11260 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC6.58□□□□□ -1.36
Lire1P11260 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC6.58□□□□□ -1.36
Lire1P11260 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Lire1P11260 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Lire1P11260 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC6.58□□□□□ -1.36
Lire1P11260 A1cf-203ENSMUST00000224400 1204 ntBASIC6.58□□□□□ -1.36
Lire1P11260 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Lire1P11260 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Lire1P11260 Olfr683-201ENSMUST00000061284 960 ntBASIC6.58□□□□□ -1.36
Lire1P11260 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Lire1P11260 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Lire1P11260 Gm37217-201ENSMUST00000194017 3521 ntBASIC6.58□□□□□ -1.36
Lire1P11260 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Lire1P11260 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Lire1P11260 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Lire1P11260 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Lire1P11260 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Lire1P11260 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Lire1P11260 Gm8822-201ENSMUST00000118948 2347 ntBASIC6.58□□□□□ -1.36
Lire1P11260 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Lire1P11260 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
Lire1P11260 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Lire1P11260 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Lire1P11260 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
Lire1P11260 AC153144.1-201ENSMUST00000221759 3139 ntBASIC6.57□□□□□ -1.36
Lire1P11260 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Lire1P11260 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Lire1P11260 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC6.57□□□□□ -1.36
Lire1P11260 Gm44116-201ENSMUST00000204269 1525 ntBASIC6.57□□□□□ -1.36
Lire1P11260 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Lire1P11260 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC6.57□□□□□ -1.36
Lire1P11260 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Lire1P11260 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Lire1P11260 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Lire1P11260 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Lire1P11260 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Lire1P11260 Gm11880-201ENSMUST00000117612 399 ntBASIC6.57□□□□□ -1.36
Lire1P11260 Gm13137-201ENSMUST00000118035 345 ntBASIC6.57□□□□□ -1.36
Lire1P11260 Gm8421-201ENSMUST00000119439 305 ntBASIC6.57□□□□□ -1.36
Lire1P11260 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC6.57□□□□□ -1.36
Lire1P11260 Gm8916-201ENSMUST00000119732 949 ntBASIC6.57□□□□□ -1.36
Lire1P11260 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC6.57□□□□□ -1.36
Lire1P11260 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Lire1P11260 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Lire1P11260 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC6.57□□□□□ -1.36
Lire1P11260 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC6.57□□□□□ -1.36
Lire1P11260 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms