Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm24490-201ENSMUST00000083803 98 ntBASIC6.45□□□□□ -1.38
Hoxd3P09027 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Hoxd3P09027 Gm43465-201ENSMUST00000200367 2802 ntBASIC6.45□□□□□ -1.38
Hoxd3P09027 Sorbs1-202ENSMUST00000099467 2817 ntAPPRIS P4 TSL 5 BASIC6.45□□□□□ -1.38
Hoxd3P09027 Smg7-201ENSMUST00000043560 5792 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Hoxd3P09027 Snx31-201ENSMUST00000013755 2696 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
Hoxd3P09027 Gm38043-201ENSMUST00000195501 5141 ntBASIC6.45□□□□□ -1.38
Hoxd3P09027 A430110L20Rik-202ENSMUST00000181680 2513 ntBASIC6.45□□□□□ -1.38
Hoxd3P09027 AL450321.1-201ENSMUST00000220600 3550 ntBASIC6.45□□□□□ -1.38
Hoxd3P09027 Rmi1-205ENSMUST00000225828 3594 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Hoxd3P09027 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Hoxd3P09027 Fbxo16-203ENSMUST00000224629 3781 ntAPPRIS P2 BASIC6.45□□□□□ -1.38
Hoxd3P09027 Prrg1-202ENSMUST00000114025 3964 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Hoxd3P09027 Lrrc46-201ENSMUST00000021251 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Hoxd3P09027 Tmem43-201ENSMUST00000032183 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Hoxd3P09027 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
Hoxd3P09027 Myt1-203ENSMUST00000108757 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Hoxd3P09027 2610037D02Rik-202ENSMUST00000185067 2997 ntBASIC6.45□□□□□ -1.38
Hoxd3P09027 Gm36879-201ENSMUST00000212313 2060 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Hoxd3P09027 Dcaf11-201ENSMUST00000072530 2601 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Hoxd3P09027 Gm44417-201ENSMUST00000203298 3359 ntBASIC6.44□□□□□ -1.38
Hoxd3P09027 E130018O15Rik-201ENSMUST00000069741 3776 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxd3P09027 Gm45294-201ENSMUST00000210685 2102 ntBASIC6.44□□□□□ -1.38
Hoxd3P09027 R3hdm1-208ENSMUST00000187900 3982 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxd3P09027 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Hoxd3P09027 Pfkfb3-201ENSMUST00000028114 4712 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxd3P09027 Rpap2-203ENSMUST00000112651 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxd3P09027 Rnf141-204ENSMUST00000175981 2333 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxd3P09027 Gm3138-201ENSMUST00000165431 1760 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Hoxd3P09027 Gm45001-201ENSMUST00000208279 2515 ntBASIC6.44□□□□□ -1.38
Hoxd3P09027 Usp7-208ENSMUST00000161046 4003 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxd3P09027 4930524O08Rik-202ENSMUST00000184444 2719 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxd3P09027 Zfp248-201ENSMUST00000069292 3683 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxd3P09027 C87436-202ENSMUST00000113698 2922 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxd3P09027 Gm2108-201ENSMUST00000165058 2177 ntBASIC6.44□□□□□ -1.38
Hoxd3P09027 Olfr152-203ENSMUST00000215394 2172 ntAPPRIS ALT1 TSL 5 BASIC6.44□□□□□ -1.38
Hoxd3P09027 Fmo5-202ENSMUST00000107049 2583 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxd3P09027 Gm16701-201ENSMUST00000181309 1627 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxd3P09027 Cth-201ENSMUST00000118539 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxd3P09027 1700024J04Rik-201ENSMUST00000093146 1821 ntBASIC6.44□□□□□ -1.38
Hoxd3P09027 Hfe-202ENSMUST00000091706 3572 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxd3P09027 Zranb1-201ENSMUST00000033265 2210 ntAPPRIS P2 TSL 2 BASIC6.44□□□□□ -1.38
Hoxd3P09027 Trbv14-201ENSMUST00000103272 368 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Hoxd3P09027 Gm23358-201ENSMUST00000103887 110 ntBASIC6.44□□□□□ -1.38
Hoxd3P09027 Gm41-201ENSMUST00000116183 1023 ntBASIC6.44□□□□□ -1.38
Hoxd3P09027 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
Hoxd3P09027 Gm14116-201ENSMUST00000117733 805 ntBASIC6.44□□□□□ -1.38
Hoxd3P09027 Zfp389-201ENSMUST00000118425 675 ntBASIC6.44□□□□□ -1.38
Hoxd3P09027 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC6.44□□□□□ -1.38
Hoxd3P09027 Gm7058-201ENSMUST00000119209 902 ntBASIC6.44□□□□□ -1.38
Hoxd3P09027 Gm13745-201ENSMUST00000121994 527 ntBASIC6.44□□□□□ -1.38
Hoxd3P09027 Rpl21-ps8-201ENSMUST00000130005 478 ntBASIC6.44□□□□□ -1.38
Hoxd3P09027 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC6.44□□□□□ -1.38
Hoxd3P09027 4833417C18Rik-201ENSMUST00000146868 1269 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxd3P09027 1700034H15Rik-205ENSMUST00000154116 926 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxd3P09027 Gm25909-201ENSMUST00000157619 121 ntBASIC6.44□□□□□ -1.38
Hoxd3P09027 Gm24853-201ENSMUST00000158026 121 ntBASIC6.44□□□□□ -1.38
Hoxd3P09027 Gm25770-201ENSMUST00000158566 115 ntBASIC6.44□□□□□ -1.38
Hoxd3P09027 Gm23822-201ENSMUST00000158739 128 ntBASIC6.44□□□□□ -1.38
Hoxd3P09027 Gm7420-201ENSMUST00000162836 842 ntBASIC6.44□□□□□ -1.38
Hoxd3P09027 Slc15a2-212ENSMUST00000168279 958 ntTSL 3 BASIC6.44□□□□□ -1.38
Hoxd3P09027 Gm3239-202ENSMUST00000169675 519 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Hoxd3P09027 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC6.44□□□□□ -1.38
Hoxd3P09027 Gm18779-201ENSMUST00000173444 577 ntBASIC6.44□□□□□ -1.38
Hoxd3P09027 Gm6155-201ENSMUST00000173735 341 ntBASIC6.44□□□□□ -1.38
Hoxd3P09027 Gm20627-202ENSMUST00000176275 564 ntTSL 5 BASIC6.44□□□□□ -1.38
Hoxd3P09027 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Hoxd3P09027 Gm7678-201ENSMUST00000181879 943 ntBASIC6.44□□□□□ -1.38
Hoxd3P09027 Gm26980-201ENSMUST00000183321 395 ntBASIC6.44□□□□□ -1.38
Hoxd3P09027 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC6.44□□□□□ -1.38
Hoxd3P09027 Gm28871-201ENSMUST00000186191 687 ntBASIC6.44□□□□□ -1.38
Hoxd3P09027 Gm29491-201ENSMUST00000189481 506 ntTSL 5 BASIC6.44□□□□□ -1.38
Hoxd3P09027 Trav5d-2-201ENSMUST00000196107 275 ntBASIC6.44□□□□□ -1.38
Hoxd3P09027 Gm42525-201ENSMUST00000196257 527 ntBASIC6.44□□□□□ -1.38
Hoxd3P09027 Trav5n-2-201ENSMUST00000197136 275 ntBASIC6.44□□□□□ -1.38
Hoxd3P09027 Gm42999-201ENSMUST00000198049 786 ntBASIC6.44□□□□□ -1.38
Hoxd3P09027 Gm43837-201ENSMUST00000200306 668 ntTSL 5 BASIC6.44□□□□□ -1.38
Hoxd3P09027 Gm43069-201ENSMUST00000201006 859 ntTSL 3 BASIC6.44□□□□□ -1.38
Hoxd3P09027 Ndufa4-203ENSMUST00000204084 409 ntTSL 3 BASIC6.44□□□□□ -1.38
Hoxd3P09027 Gm44140-201ENSMUST00000204157 675 ntTSL 3 BASIC6.44□□□□□ -1.38
Hoxd3P09027 Klra13-ps-203ENSMUST00000204367 850 ntBASIC6.44□□□□□ -1.38
Hoxd3P09027 Gm44861-201ENSMUST00000208325 1220 ntBASIC6.44□□□□□ -1.38
Hoxd3P09027 AC160970.1-201ENSMUST00000219311 475 ntBASIC6.44□□□□□ -1.38
Hoxd3P09027 AC132954.2-201ENSMUST00000222400 403 ntBASIC6.44□□□□□ -1.38
Hoxd3P09027 Gm2721-202ENSMUST00000222652 459 ntTSL 5 BASIC6.44□□□□□ -1.38
Hoxd3P09027 AC104832.1-201ENSMUST00000222938 550 ntBASIC6.44□□□□□ -1.38
Hoxd3P09027 Gm9280-201ENSMUST00000223155 517 ntBASIC6.44□□□□□ -1.38
Hoxd3P09027 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Hoxd3P09027 Mir30c-1-201ENSMUST00000083556 89 ntBASIC6.44□□□□□ -1.38
Hoxd3P09027 Gm23846-201ENSMUST00000083835 107 ntBASIC6.44□□□□□ -1.38
Hoxd3P09027 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC6.44□□□□□ -1.38
Hoxd3P09027 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxd3P09027 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxd3P09027 Spp1-205ENSMUST00000112748 1456 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxd3P09027 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC6.44□□□□□ -1.38
Hoxd3P09027 Dennd2d-204ENSMUST00000183271 2050 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxd3P09027 AC158596.1-201ENSMUST00000217315 2265 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxd3P09027 Ptpro-207ENSMUST00000203914 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxd3P09027 Trim39-205ENSMUST00000173369 2914 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxd3P09027 Ppwd1-201ENSMUST00000022226 2342 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms