Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm7780-201ENSMUST00000214787 406 ntBASIC5.29□□□□□ -1.56
Hmgb3O54879 AC151901.1-201ENSMUST00000218274 180 ntBASIC5.29□□□□□ -1.56
Hmgb3O54879 Gm5948-201ENSMUST00000219627 839 ntBASIC5.29□□□□□ -1.56
Hmgb3O54879 Gm9289-201ENSMUST00000221269 606 ntBASIC5.29□□□□□ -1.56
Hmgb3O54879 AC150661.1-201ENSMUST00000222563 495 ntBASIC5.29□□□□□ -1.56
Hmgb3O54879 AL844586.1-201ENSMUST00000224297 1042 ntBASIC5.29□□□□□ -1.56
Hmgb3O54879 AC132833.4-201ENSMUST00000228313 203 ntBASIC5.29□□□□□ -1.56
Hmgb3O54879 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Hmgb3O54879 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Hmgb3O54879 Ankrd55-205ENSMUST00000223871 3209 ntBASIC5.29□□□□□ -1.56
Hmgb3O54879 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Hmgb3O54879 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Hmgb3O54879 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC5.29□□□□□ -1.56
Hmgb3O54879 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Hmgb3O54879 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Hmgb3O54879 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Hmgb3O54879 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Hmgb3O54879 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC5.29□□□□□ -1.56
Hmgb3O54879 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Hmgb3O54879 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Hmgb3O54879 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Hmgb3O54879 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Hmgb3O54879 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Hmgb3O54879 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Hmgb3O54879 Gm43176-201ENSMUST00000199653 2989 ntBASIC5.28□□□□□ -1.56
Hmgb3O54879 Gm37911-201ENSMUST00000193099 1545 ntBASIC5.28□□□□□ -1.56
Hmgb3O54879 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Hmgb3O54879 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Hmgb3O54879 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Hmgb3O54879 Lrrc46-201ENSMUST00000021251 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Hmgb3O54879 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Hmgb3O54879 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Hmgb3O54879 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC5.28□□□□□ -1.56
Hmgb3O54879 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Hmgb3O54879 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Hmgb3O54879 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC5.28□□□□□ -1.56
Hmgb3O54879 Gm22774-201ENSMUST00000102084 109 ntBASIC5.28□□□□□ -1.56
Hmgb3O54879 Mir704-201ENSMUST00000102106 77 ntBASIC5.28□□□□□ -1.56
Hmgb3O54879 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Hmgb3O54879 Gm14869-201ENSMUST00000119007 884 ntBASIC5.28□□□□□ -1.56
Hmgb3O54879 Gm9439-201ENSMUST00000119554 973 ntBASIC5.28□□□□□ -1.56
Hmgb3O54879 Gm14900-201ENSMUST00000120304 733 ntBASIC5.28□□□□□ -1.56
Hmgb3O54879 M6pr-ps-201ENSMUST00000120481 830 ntBASIC5.28□□□□□ -1.56
Hmgb3O54879 Gm12229-201ENSMUST00000120487 468 ntBASIC5.28□□□□□ -1.56
Hmgb3O54879 Gm14613-201ENSMUST00000122239 752 ntBASIC5.28□□□□□ -1.56
Hmgb3O54879 Gm13964-201ENSMUST00000133815 734 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Hmgb3O54879 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC5.28□□□□□ -1.56
Hmgb3O54879 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Hmgb3O54879 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC5.28□□□□□ -1.56
Hmgb3O54879 n-R5s93-201ENSMUST00000180091 119 ntBASIC5.28□□□□□ -1.56
Hmgb3O54879 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC5.28□□□□□ -1.56
Hmgb3O54879 BC065403-202ENSMUST00000184796 1043 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Hmgb3O54879 Gm5261-201ENSMUST00000185860 713 ntBASIC5.28□□□□□ -1.56
Hmgb3O54879 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Hmgb3O54879 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Hmgb3O54879 Gm42472-201ENSMUST00000201626 859 ntBASIC5.28□□□□□ -1.56
Hmgb3O54879 Gm5305-201ENSMUST00000204010 746 ntBASIC5.28□□□□□ -1.56
Hmgb3O54879 Gm4247-201ENSMUST00000211441 1042 ntBASIC5.28□□□□□ -1.56
Hmgb3O54879 AC139579.1-201ENSMUST00000214560 606 ntTSL 3 BASIC5.28□□□□□ -1.56
Hmgb3O54879 Gm18914-201ENSMUST00000214625 616 ntBASIC5.28□□□□□ -1.56
Hmgb3O54879 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Hmgb3O54879 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC5.28□□□□□ -1.56
Hmgb3O54879 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC5.28□□□□□ -1.56
Hmgb3O54879 CT030254.1-201ENSMUST00000225450 1078 ntBASIC5.28□□□□□ -1.56
Hmgb3O54879 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Hmgb3O54879 AC131586.4-201ENSMUST00000228424 668 ntBASIC5.28□□□□□ -1.56
Hmgb3O54879 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Hmgb3O54879 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Hmgb3O54879 Gm10258-201ENSMUST00000091270 2123 ntBASIC5.28□□□□□ -1.56
Hmgb3O54879 Gm43891-201ENSMUST00000205132 3112 ntBASIC5.28□□□□□ -1.56
Hmgb3O54879 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC5.28□□□□□ -1.56
Hmgb3O54879 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Hmgb3O54879 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Hmgb3O54879 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Hmgb3O54879 Gm21846-201ENSMUST00000179257 3073 ntBASIC5.28□□□□□ -1.56
Hmgb3O54879 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Hmgb3O54879 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Hmgb3O54879 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC5.28□□□□□ -1.56
Hmgb3O54879 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Hmgb3O54879 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
Hmgb3O54879 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
Hmgb3O54879 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Hmgb3O54879 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
Hmgb3O54879 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Hmgb3O54879 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Hmgb3O54879 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Hmgb3O54879 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Hmgb3O54879 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Hmgb3O54879 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Hmgb3O54879 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Hmgb3O54879 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC5.27□□□□□ -1.57
Hmgb3O54879 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Hmgb3O54879 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Hmgb3O54879 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.27□□□□□ -1.57
Hmgb3O54879 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC5.27□□□□□ -1.57
Hmgb3O54879 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Hmgb3O54879 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Hmgb3O54879 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC5.27□□□□□ -1.57
Hmgb3O54879 Gm15778-201ENSMUST00000118469 608 ntBASIC5.27□□□□□ -1.57
Hmgb3O54879 Gm15040-201ENSMUST00000118561 1241 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms