Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc180J3QNE4 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc180J3QNE4 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC12.03□□□□□ -0.48
Ccdc180J3QNE4 AC151904.1-201ENSMUST00000219945 1498 ntBASIC12.03□□□□□ -0.48
Ccdc180J3QNE4 Med13l-202ENSMUST00000201010 7781 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc180J3QNE4 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc180J3QNE4 Mir7037-201ENSMUST00000184414 65 ntBASIC12.03□□□□□ -0.48
Ccdc180J3QNE4 Mir6361-201ENSMUST00000185079 101 ntBASIC12.03□□□□□ -0.48
Ccdc180J3QNE4 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc180J3QNE4 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc180J3QNE4 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc180J3QNE4 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc180J3QNE4 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc180J3QNE4 Ssh2-201ENSMUST00000037912 9178 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc180J3QNE4 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Ccdc180J3QNE4 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc180J3QNE4 Atp8a1-207ENSMUST00000135930 8069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc180J3QNE4 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc180J3QNE4 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc180J3QNE4 Deptor-202ENSMUST00000096433 8547 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc180J3QNE4 Chd8-201ENSMUST00000089752 8190 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc180J3QNE4 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc180J3QNE4 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc180J3QNE4 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc180J3QNE4 Ddx6-201ENSMUST00000170489 6065 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Ccdc180J3QNE4 Gm10862-201ENSMUST00000193956 3350 ntBASIC12.02□□□□□ -0.49
Ccdc180J3QNE4 Gm15016-201ENSMUST00000117300 720 ntBASIC12.02□□□□□ -0.49
Ccdc180J3QNE4 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC12.02□□□□□ -0.49
Ccdc180J3QNE4 Gm25363-201ENSMUST00000158850 245 ntBASIC12.02□□□□□ -0.49
Ccdc180J3QNE4 Gm16269-201ENSMUST00000160532 409 ntBASIC12.02□□□□□ -0.49
Ccdc180J3QNE4 Gm2539-203ENSMUST00000181352 746 ntBASIC12.02□□□□□ -0.49
Ccdc180J3QNE4 Mir7220-201ENSMUST00000183978 60 ntBASIC12.02□□□□□ -0.49
Ccdc180J3QNE4 Gm37784-201ENSMUST00000193233 189 ntBASIC12.02□□□□□ -0.49
Ccdc180J3QNE4 Gm4332-201ENSMUST00000196114 346 ntBASIC12.02□□□□□ -0.49
Ccdc180J3QNE4 Gm9321-201ENSMUST00000221179 778 ntBASIC12.02□□□□□ -0.49
Ccdc180J3QNE4 AC122459.2-201ENSMUST00000227099 638 ntBASIC12.02□□□□□ -0.49
Ccdc180J3QNE4 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC12.02□□□□□ -0.49
Ccdc180J3QNE4 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Ccdc180J3QNE4 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Ccdc180J3QNE4 Fbln5-201ENSMUST00000021603 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc180J3QNE4 Dpy19l3-201ENSMUST00000051377 8006 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc180J3QNE4 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc180J3QNE4 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc180J3QNE4 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Ccdc180J3QNE4 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Ccdc180J3QNE4 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc180J3QNE4 Gm43421-201ENSMUST00000200044 2905 ntBASIC12.01□□□□□ -0.49
Ccdc180J3QNE4 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC12.01□□□□□ -0.49
Ccdc180J3QNE4 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc180J3QNE4 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc180J3QNE4 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc180J3QNE4 Akap2-202ENSMUST00000098064 7172 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc180J3QNE4 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc180J3QNE4 Ryr1-208ENSMUST00000214374 15300 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc180J3QNE4 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc180J3QNE4 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc180J3QNE4 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc180J3QNE4 Mup-ps16-201ENSMUST00000120085 596 ntBASIC12.01□□□□□ -0.49
Ccdc180J3QNE4 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc180J3QNE4 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC12.01□□□□□ -0.49
Ccdc180J3QNE4 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC12.01□□□□□ -0.49
Ccdc180J3QNE4 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC12.01□□□□□ -0.49
Ccdc180J3QNE4 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC12.01□□□□□ -0.49
Ccdc180J3QNE4 Gm2225-201ENSMUST00000209570 377 ntBASIC12.01□□□□□ -0.49
Ccdc180J3QNE4 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC12.01□□□□□ -0.49
Ccdc180J3QNE4 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC12.01□□□□□ -0.49
Ccdc180J3QNE4 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC12.01□□□□□ -0.49
Ccdc180J3QNE4 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc180J3QNE4 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc180J3QNE4 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc180J3QNE4 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc180J3QNE4 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc180J3QNE4 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc180J3QNE4 AC153143.1-201ENSMUST00000222966 1340 ntBASIC12.01□□□□□ -0.49
Ccdc180J3QNE4 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC12□□□□□ -0.49
Ccdc180J3QNE4 Gm11848-201ENSMUST00000121207 973 ntBASIC12□□□□□ -0.49
Ccdc180J3QNE4 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC12□□□□□ -0.49
Ccdc180J3QNE4 Gm18833-201ENSMUST00000173218 862 ntBASIC12□□□□□ -0.49
Ccdc180J3QNE4 AC157822.1-201ENSMUST00000196643 80 ntBASIC12□□□□□ -0.49
Ccdc180J3QNE4 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc180J3QNE4 Gm44265-201ENSMUST00000203631 465 ntBASIC12□□□□□ -0.49
Ccdc180J3QNE4 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC12□□□□□ -0.49
Ccdc180J3QNE4 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc180J3QNE4 Ctnnd1-208ENSMUST00000111677 5789 ntTSL 5 BASIC12□□□□□ -0.49
Ccdc180J3QNE4 Rapgef6-210ENSMUST00000207429 5164 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc180J3QNE4 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc180J3QNE4 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC12□□□□□ -0.49
Ccdc180J3QNE4 Cep135-201ENSMUST00000049060 5313 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc180J3QNE4 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc180J3QNE4 Gm22820-201ENSMUST00000157205 329 ntBASIC12□□□□□ -0.49
Ccdc180J3QNE4 Gm25244-201ENSMUST00000178089 132 ntBASIC12□□□□□ -0.49
Ccdc180J3QNE4 Gm37376-201ENSMUST00000192176 453 ntBASIC12□□□□□ -0.49
Ccdc180J3QNE4 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc180J3QNE4 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC12□□□□□ -0.49
Ccdc180J3QNE4 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc180J3QNE4 AC127242.4-201ENSMUST00000221242 470 ntBASIC12□□□□□ -0.49
Ccdc180J3QNE4 AC113125.2-201ENSMUST00000226837 362 ntBASIC12□□□□□ -0.49
Ccdc180J3QNE4 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC12□□□□□ -0.49
Ccdc180J3QNE4 CT025566.1-202ENSMUST00000224800 2511 ntBASIC12□□□□□ -0.49
Ccdc180J3QNE4 Dlg2-203ENSMUST00000107193 4910 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms