Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
NpcdF8VQB8 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
NpcdF8VQB8 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
NpcdF8VQB8 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
NpcdF8VQB8 Galnt7-202ENSMUST00000110316 3413 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
NpcdF8VQB8 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC8.6□□□□□ -1.03
NpcdF8VQB8 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
NpcdF8VQB8 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC8.6□□□□□ -1.03
NpcdF8VQB8 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
NpcdF8VQB8 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
NpcdF8VQB8 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC8.6□□□□□ -1.03
NpcdF8VQB8 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC8.6□□□□□ -1.03
NpcdF8VQB8 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
NpcdF8VQB8 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC8.6□□□□□ -1.03
NpcdF8VQB8 Gm11902-201ENSMUST00000118849 270 ntBASIC8.6□□□□□ -1.03
NpcdF8VQB8 Gm13357-201ENSMUST00000120528 537 ntBASIC8.6□□□□□ -1.03
NpcdF8VQB8 Gm15780-201ENSMUST00000121283 935 ntBASIC8.6□□□□□ -1.03
NpcdF8VQB8 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
NpcdF8VQB8 Gm24687-201ENSMUST00000157758 241 ntBASIC8.6□□□□□ -1.03
NpcdF8VQB8 Gm23897-201ENSMUST00000158110 158 ntBASIC8.6□□□□□ -1.03
NpcdF8VQB8 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
NpcdF8VQB8 Gm9672-201ENSMUST00000166437 425 ntBASIC8.6□□□□□ -1.03
NpcdF8VQB8 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC8.6□□□□□ -1.03
NpcdF8VQB8 Gm27160-201ENSMUST00000184837 199 ntBASIC8.6□□□□□ -1.03
NpcdF8VQB8 Gm38237-201ENSMUST00000193366 376 ntBASIC8.6□□□□□ -1.03
NpcdF8VQB8 Ighv1-10-201ENSMUST00000194372 355 ntBASIC8.6□□□□□ -1.03
NpcdF8VQB8 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC8.6□□□□□ -1.03
NpcdF8VQB8 Gm37987-201ENSMUST00000194999 825 ntBASIC8.6□□□□□ -1.03
NpcdF8VQB8 Gm37637-201ENSMUST00000195540 1256 ntBASIC8.6□□□□□ -1.03
NpcdF8VQB8 Gm5711-201ENSMUST00000197896 421 ntBASIC8.6□□□□□ -1.03
NpcdF8VQB8 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC8.6□□□□□ -1.03
NpcdF8VQB8 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC8.6□□□□□ -1.03
NpcdF8VQB8 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
NpcdF8VQB8 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC8.6□□□□□ -1.03
NpcdF8VQB8 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC8.6□□□□□ -1.03
NpcdF8VQB8 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
NpcdF8VQB8 AC159205.2-201ENSMUST00000223759 816 ntBASIC8.6□□□□□ -1.03
NpcdF8VQB8 AC131029.2-201ENSMUST00000226696 628 ntBASIC8.6□□□□□ -1.03
NpcdF8VQB8 AC132918.1-201ENSMUST00000227877 925 ntBASIC8.6□□□□□ -1.03
NpcdF8VQB8 AC156574.2-201ENSMUST00000228023 282 ntBASIC8.6□□□□□ -1.03
NpcdF8VQB8 AC157572.4-201ENSMUST00000228203 549 ntBASIC8.6□□□□□ -1.03
NpcdF8VQB8 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
NpcdF8VQB8 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
NpcdF8VQB8 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
NpcdF8VQB8 Gm18493-201ENSMUST00000192084 1612 ntBASIC8.6□□□□□ -1.03
NpcdF8VQB8 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
NpcdF8VQB8 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
NpcdF8VQB8 Hepacam2-201ENSMUST00000049985 2328 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
NpcdF8VQB8 Gm27013-202ENSMUST00000205067 1436 ntBASIC8.6□□□□□ -1.03
NpcdF8VQB8 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
NpcdF8VQB8 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
NpcdF8VQB8 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
NpcdF8VQB8 Gm12346-201ENSMUST00000121455 2255 ntBASIC8.6□□□□□ -1.03
NpcdF8VQB8 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
NpcdF8VQB8 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
NpcdF8VQB8 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
NpcdF8VQB8 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
NpcdF8VQB8 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
NpcdF8VQB8 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
NpcdF8VQB8 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
NpcdF8VQB8 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
NpcdF8VQB8 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
NpcdF8VQB8 2900027M19Rik-201ENSMUST00000207411 4448 ntBASIC8.6□□□□□ -1.03
NpcdF8VQB8 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
NpcdF8VQB8 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
NpcdF8VQB8 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC8.59□□□□□ -1.03
NpcdF8VQB8 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
NpcdF8VQB8 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
NpcdF8VQB8 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
NpcdF8VQB8 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
NpcdF8VQB8 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
NpcdF8VQB8 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
NpcdF8VQB8 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
NpcdF8VQB8 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
NpcdF8VQB8 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
NpcdF8VQB8 Musk-208ENSMUST00000179951 3376 ntTSL 5 BASIC8.59□□□□□ -1.03
NpcdF8VQB8 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
NpcdF8VQB8 Gm23979-201ENSMUST00000104071 128 ntBASIC8.59□□□□□ -1.03
NpcdF8VQB8 Gm23311-201ENSMUST00000104152 134 ntBASIC8.59□□□□□ -1.03
NpcdF8VQB8 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC8.59□□□□□ -1.03
NpcdF8VQB8 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC8.59□□□□□ -1.03
NpcdF8VQB8 Fate1-202ENSMUST00000114569 1053 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
NpcdF8VQB8 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
NpcdF8VQB8 Gm11257-201ENSMUST00000121313 315 ntBASIC8.59□□□□□ -1.03
NpcdF8VQB8 Gm23773-201ENSMUST00000158985 296 ntBASIC8.59□□□□□ -1.03
NpcdF8VQB8 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC8.59□□□□□ -1.03
NpcdF8VQB8 Gm5272-201ENSMUST00000182730 982 ntBASIC8.59□□□□□ -1.03
NpcdF8VQB8 Zfp572-202ENSMUST00000184208 1078 ntBASIC8.59□□□□□ -1.03
NpcdF8VQB8 Gm28428-201ENSMUST00000188886 697 ntBASIC8.59□□□□□ -1.03
NpcdF8VQB8 Gm29143-201ENSMUST00000189462 201 ntBASIC8.59□□□□□ -1.03
NpcdF8VQB8 Gm37741-201ENSMUST00000191768 1256 ntBASIC8.59□□□□□ -1.03
NpcdF8VQB8 Gm36939-201ENSMUST00000194889 439 ntBASIC8.59□□□□□ -1.03
NpcdF8VQB8 Gm43459-201ENSMUST00000202093 331 ntBASIC8.59□□□□□ -1.03
NpcdF8VQB8 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
NpcdF8VQB8 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC8.59□□□□□ -1.03
NpcdF8VQB8 Gm4556-201ENSMUST00000217808 355 ntBASIC8.59□□□□□ -1.03
NpcdF8VQB8 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
NpcdF8VQB8 AC126685.1-201ENSMUST00000221001 121 ntBASIC8.59□□□□□ -1.03
NpcdF8VQB8 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC8.59□□□□□ -1.03
NpcdF8VQB8 AC187103.4-201ENSMUST00000225399 300 ntBASIC8.59□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms