Protein–RNA interactions for Protein: Q9WVD4

Clcn5, H(+)/Cl(-) exchange transporter 5, mousemouse

Predictions only

Length 746 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn5Q9WVD4 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Clcn5Q9WVD4 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clcn5Q9WVD4 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clcn5Q9WVD4 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clcn5Q9WVD4 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clcn5Q9WVD4 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Clcn5Q9WVD4 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clcn5Q9WVD4 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clcn5Q9WVD4 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clcn5Q9WVD4 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Clcn5Q9WVD4 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Clcn5Q9WVD4 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clcn5Q9WVD4 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clcn5Q9WVD4 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.82■□□□□ 0.6
Clcn5Q9WVD4 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.82■□□□□ 0.6
Clcn5Q9WVD4 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clcn5Q9WVD4 Gm5417-201ENSMUST00000079706 384 ntBASIC18.82■□□□□ 0.6
Clcn5Q9WVD4 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clcn5Q9WVD4 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clcn5Q9WVD4 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clcn5Q9WVD4 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn5Q9WVD4 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn5Q9WVD4 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn5Q9WVD4 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn5Q9WVD4 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn5Q9WVD4 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn5Q9WVD4 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn5Q9WVD4 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Clcn5Q9WVD4 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn5Q9WVD4 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Clcn5Q9WVD4 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.81■□□□□ 0.6
Clcn5Q9WVD4 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.81■□□□□ 0.6
Clcn5Q9WVD4 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.81■□□□□ 0.6
Clcn5Q9WVD4 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn5Q9WVD4 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn5Q9WVD4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn5Q9WVD4 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.81■□□□□ 0.6
Clcn5Q9WVD4 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn5Q9WVD4 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn5Q9WVD4 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn5Q9WVD4 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Clcn5Q9WVD4 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clcn5Q9WVD4 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.8■□□□□ 0.6
Clcn5Q9WVD4 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.8■□□□□ 0.6
Clcn5Q9WVD4 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Clcn5Q9WVD4 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clcn5Q9WVD4 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clcn5Q9WVD4 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Clcn5Q9WVD4 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clcn5Q9WVD4 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn5Q9WVD4 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn5Q9WVD4 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn5Q9WVD4 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.79■□□□□ 0.6
Clcn5Q9WVD4 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn5Q9WVD4 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn5Q9WVD4 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Clcn5Q9WVD4 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Clcn5Q9WVD4 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn5Q9WVD4 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.79■□□□□ 0.6
Clcn5Q9WVD4 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn5Q9WVD4 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn5Q9WVD4 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn5Q9WVD4 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn5Q9WVD4 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn5Q9WVD4 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn5Q9WVD4 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn5Q9WVD4 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn5Q9WVD4 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Clcn5Q9WVD4 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.78■□□□□ 0.6
Clcn5Q9WVD4 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn5Q9WVD4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn5Q9WVD4 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.78■□□□□ 0.6
Clcn5Q9WVD4 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn5Q9WVD4 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.78■□□□□ 0.6
Clcn5Q9WVD4 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Clcn5Q9WVD4 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn5Q9WVD4 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn5Q9WVD4 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn5Q9WVD4 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn5Q9WVD4 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn5Q9WVD4 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clcn5Q9WVD4 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Clcn5Q9WVD4 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.77■□□□□ 0.6
Clcn5Q9WVD4 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clcn5Q9WVD4 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.77■□□□□ 0.6
Clcn5Q9WVD4 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clcn5Q9WVD4 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clcn5Q9WVD4 Gm7367-201ENSMUST00000057611 492 ntBASIC18.77■□□□□ 0.6
Clcn5Q9WVD4 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Clcn5Q9WVD4 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.77■□□□□ 0.59
Clcn5Q9WVD4 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Clcn5Q9WVD4 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.77■□□□□ 0.59
Clcn5Q9WVD4 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clcn5Q9WVD4 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clcn5Q9WVD4 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.76■□□□□ 0.59
Clcn5Q9WVD4 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.76■□□□□ 0.59
Clcn5Q9WVD4 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Clcn5Q9WVD4 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.76■□□□□ 0.59
Clcn5Q9WVD4 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Clcn5Q9WVD4 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms