Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Tubd1Q9R1K7 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tubd1Q9R1K7 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Tubd1Q9R1K7 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
Tubd1Q9R1K7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tubd1Q9R1K7 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tubd1Q9R1K7 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.55■□□□□ 0.56
Tubd1Q9R1K7 Fst-202ENSMUST00000223640 2612 ntBASIC18.55■□□□□ 0.56
Tubd1Q9R1K7 Grk6-206ENSMUST00000224995 2971 ntBASIC18.55■□□□□ 0.56
Tubd1Q9R1K7 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Tubd1Q9R1K7 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Tubd1Q9R1K7 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tubd1Q9R1K7 Gm11927-201ENSMUST00000118472 759 ntBASIC18.55■□□□□ 0.56
Tubd1Q9R1K7 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.55■□□□□ 0.56
Tubd1Q9R1K7 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.55■□□□□ 0.56
Tubd1Q9R1K7 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tubd1Q9R1K7 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tubd1Q9R1K7 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Tubd1Q9R1K7 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tubd1Q9R1K7 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tubd1Q9R1K7 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.54■□□□□ 0.56
Tubd1Q9R1K7 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tubd1Q9R1K7 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tubd1Q9R1K7 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tubd1Q9R1K7 Gm2559-201ENSMUST00000201323 363 ntBASIC18.54■□□□□ 0.56
Tubd1Q9R1K7 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tubd1Q9R1K7 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tubd1Q9R1K7 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tubd1Q9R1K7 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.54■□□□□ 0.56
Tubd1Q9R1K7 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tubd1Q9R1K7 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tubd1Q9R1K7 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Tubd1Q9R1K7 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tubd1Q9R1K7 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tubd1Q9R1K7 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Tubd1Q9R1K7 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tubd1Q9R1K7 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.53■□□□□ 0.56
Tubd1Q9R1K7 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.53■□□□□ 0.56
Tubd1Q9R1K7 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Tubd1Q9R1K7 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.53■□□□□ 0.56
Tubd1Q9R1K7 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Tubd1Q9R1K7 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tubd1Q9R1K7 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tubd1Q9R1K7 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tubd1Q9R1K7 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Tubd1Q9R1K7 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tubd1Q9R1K7 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tubd1Q9R1K7 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tubd1Q9R1K7 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tubd1Q9R1K7 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Tubd1Q9R1K7 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.52■□□□□ 0.56
Tubd1Q9R1K7 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.52■□□□□ 0.56
Tubd1Q9R1K7 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tubd1Q9R1K7 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
Tubd1Q9R1K7 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Tubd1Q9R1K7 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Tubd1Q9R1K7 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tubd1Q9R1K7 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tubd1Q9R1K7 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Tubd1Q9R1K7 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tubd1Q9R1K7 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tubd1Q9R1K7 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.51■□□□□ 0.55
Tubd1Q9R1K7 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.51■□□□□ 0.55
Tubd1Q9R1K7 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tubd1Q9R1K7 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tubd1Q9R1K7 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.51■□□□□ 0.55
Tubd1Q9R1K7 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tubd1Q9R1K7 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tubd1Q9R1K7 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tubd1Q9R1K7 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tubd1Q9R1K7 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Tubd1Q9R1K7 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tubd1Q9R1K7 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tubd1Q9R1K7 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tubd1Q9R1K7 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.5■□□□□ 0.55
Tubd1Q9R1K7 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.5■□□□□ 0.55
Tubd1Q9R1K7 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.5■□□□□ 0.55
Tubd1Q9R1K7 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tubd1Q9R1K7 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.5■□□□□ 0.55
Tubd1Q9R1K7 Gm20049-201ENSMUST00000219950 730 ntBASIC18.5■□□□□ 0.55
Tubd1Q9R1K7 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tubd1Q9R1K7 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.5■□□□□ 0.55
Tubd1Q9R1K7 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tubd1Q9R1K7 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tubd1Q9R1K7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tubd1Q9R1K7 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Tubd1Q9R1K7 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.5■□□□□ 0.55
Tubd1Q9R1K7 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Tubd1Q9R1K7 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.5■□□□□ 0.55
Tubd1Q9R1K7 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Tubd1Q9R1K7 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubd1Q9R1K7 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubd1Q9R1K7 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tubd1Q9R1K7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Tubd1Q9R1K7 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Tubd1Q9R1K7 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tubd1Q9R1K7 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubd1Q9R1K7 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubd1Q9R1K7 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubd1Q9R1K7 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms