Protein–RNA interactions for Protein: Q9R118

Htra1, Serine protease HTRA1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Htra1Q9R118 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Htra1Q9R118 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Htra1Q9R118 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Htra1Q9R118 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Htra1Q9R118 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Htra1Q9R118 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Htra1Q9R118 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Htra1Q9R118 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Htra1Q9R118 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Htra1Q9R118 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.81■□□□□ 0.28
Htra1Q9R118 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Htra1Q9R118 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Htra1Q9R118 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Htra1Q9R118 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.81■□□□□ 0.28
Htra1Q9R118 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.81■□□□□ 0.28
Htra1Q9R118 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Htra1Q9R118 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Htra1Q9R118 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Htra1Q9R118 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Htra1Q9R118 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Htra1Q9R118 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Htra1Q9R118 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Htra1Q9R118 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.81■□□□□ 0.28
Htra1Q9R118 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Htra1Q9R118 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Htra1Q9R118 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.8■□□□□ 0.28
Htra1Q9R118 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Htra1Q9R118 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Htra1Q9R118 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Htra1Q9R118 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Htra1Q9R118 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.8■□□□□ 0.28
Htra1Q9R118 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Htra1Q9R118 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Htra1Q9R118 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Htra1Q9R118 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Htra1Q9R118 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Htra1Q9R118 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Htra1Q9R118 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Htra1Q9R118 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Htra1Q9R118 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Htra1Q9R118 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Htra1Q9R118 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Htra1Q9R118 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Htra1Q9R118 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
Htra1Q9R118 Gm26833-201ENSMUST00000180899 440 ntBASIC16.79■□□□□ 0.28
Htra1Q9R118 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Htra1Q9R118 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Htra1Q9R118 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Htra1Q9R118 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Htra1Q9R118 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Htra1Q9R118 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Htra1Q9R118 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.79■□□□□ 0.28
Htra1Q9R118 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Htra1Q9R118 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Htra1Q9R118 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.78■□□□□ 0.28
Htra1Q9R118 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Htra1Q9R118 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Htra1Q9R118 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Htra1Q9R118 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Htra1Q9R118 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Htra1Q9R118 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Htra1Q9R118 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.78■□□□□ 0.28
Htra1Q9R118 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Htra1Q9R118 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Htra1Q9R118 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Htra1Q9R118 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Htra1Q9R118 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Htra1Q9R118 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Htra1Q9R118 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Htra1Q9R118 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Htra1Q9R118 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Htra1Q9R118 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Htra1Q9R118 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Htra1Q9R118 Gm27801-201ENSMUST00000184174 223 ntBASIC16.77■□□□□ 0.28
Htra1Q9R118 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.77■□□□□ 0.28
Htra1Q9R118 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Htra1Q9R118 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
Htra1Q9R118 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.77■□□□□ 0.27
Htra1Q9R118 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Htra1Q9R118 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Htra1Q9R118 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Htra1Q9R118 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Htra1Q9R118 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Htra1Q9R118 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Htra1Q9R118 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Htra1Q9R118 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Htra1Q9R118 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Htra1Q9R118 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Htra1Q9R118 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.76■□□□□ 0.27
Htra1Q9R118 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.76■□□□□ 0.27
Htra1Q9R118 Gm43017-201ENSMUST00000198296 752 ntBASIC16.76■□□□□ 0.27
Htra1Q9R118 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Htra1Q9R118 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Htra1Q9R118 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Htra1Q9R118 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Htra1Q9R118 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Htra1Q9R118 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Htra1Q9R118 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Htra1Q9R118 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Htra1Q9R118 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms