Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Upf1Q9EPU0 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC20.82■□□□□ 0.92
Upf1Q9EPU0 Vti1a-206ENSMUST00000225529 1244 ntBASIC20.82■□□□□ 0.92
Upf1Q9EPU0 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Upf1Q9EPU0 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC20.82■□□□□ 0.92
Upf1Q9EPU0 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Upf1Q9EPU0 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Upf1Q9EPU0 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC20.81■□□□□ 0.92
Upf1Q9EPU0 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Upf1Q9EPU0 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Upf1Q9EPU0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Upf1Q9EPU0 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Upf1Q9EPU0 Gm2651-201ENSMUST00000203560 838 ntBASIC20.81■□□□□ 0.92
Upf1Q9EPU0 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Upf1Q9EPU0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Upf1Q9EPU0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Upf1Q9EPU0 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Upf1Q9EPU0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Upf1Q9EPU0 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Upf1Q9EPU0 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.8■□□□□ 0.92
Upf1Q9EPU0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Upf1Q9EPU0 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Upf1Q9EPU0 Gm1401-201ENSMUST00000122048 772 ntBASIC20.8■□□□□ 0.92
Upf1Q9EPU0 Gm10052-201ENSMUST00000168019 960 ntBASIC20.8■□□□□ 0.92
Upf1Q9EPU0 Gm7729-201ENSMUST00000050143 801 ntBASIC20.8■□□□□ 0.92
Upf1Q9EPU0 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Upf1Q9EPU0 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Upf1Q9EPU0 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Upf1Q9EPU0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Upf1Q9EPU0 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Upf1Q9EPU0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Upf1Q9EPU0 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Upf1Q9EPU0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Upf1Q9EPU0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Upf1Q9EPU0 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Upf1Q9EPU0 Gm10418-201ENSMUST00000100943 576 ntBASIC20.79■□□□□ 0.92
Upf1Q9EPU0 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Upf1Q9EPU0 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.79■□□□□ 0.92
Upf1Q9EPU0 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Upf1Q9EPU0 Gm27702-201ENSMUST00000184512 56 ntBASIC20.79■□□□□ 0.92
Upf1Q9EPU0 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC20.79■□□□□ 0.92
Upf1Q9EPU0 Gm10576-201ENSMUST00000191927 825 ntBASIC20.79■□□□□ 0.92
Upf1Q9EPU0 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC20.79■□□□□ 0.92
Upf1Q9EPU0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.79■□□□□ 0.92
Upf1Q9EPU0 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Upf1Q9EPU0 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.79■□□□□ 0.92
Upf1Q9EPU0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Upf1Q9EPU0 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Upf1Q9EPU0 Gm7638-201ENSMUST00000121348 967 ntBASIC20.78■□□□□ 0.92
Upf1Q9EPU0 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Upf1Q9EPU0 Mir2861-201ENSMUST00000175539 82 ntBASIC20.78■□□□□ 0.92
Upf1Q9EPU0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Upf1Q9EPU0 Gm43332-201ENSMUST00000202511 1044 ntBASIC20.78■□□□□ 0.92
Upf1Q9EPU0 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC20.78■□□□□ 0.92
Upf1Q9EPU0 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC20.78■□□□□ 0.92
Upf1Q9EPU0 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Upf1Q9EPU0 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Upf1Q9EPU0 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Upf1Q9EPU0 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.78■□□□□ 0.92
Upf1Q9EPU0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Upf1Q9EPU0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Upf1Q9EPU0 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Upf1Q9EPU0 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.77■□□□□ 0.92
Upf1Q9EPU0 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Upf1Q9EPU0 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Upf1Q9EPU0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Upf1Q9EPU0 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC20.77■□□□□ 0.92
Upf1Q9EPU0 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
Upf1Q9EPU0 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Upf1Q9EPU0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Upf1Q9EPU0 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Upf1Q9EPU0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Upf1Q9EPU0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Upf1Q9EPU0 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Upf1Q9EPU0 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Upf1Q9EPU0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Upf1Q9EPU0 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Upf1Q9EPU0 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Upf1Q9EPU0 Mir770-201ENSMUST00000103252 94 ntBASIC20.76■□□□□ 0.91
Upf1Q9EPU0 Gm11860-201ENSMUST00000122346 1010 ntBASIC20.76■□□□□ 0.91
Upf1Q9EPU0 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Upf1Q9EPU0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.76■□□□□ 0.91
Upf1Q9EPU0 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC20.76■□□□□ 0.91
Upf1Q9EPU0 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Upf1Q9EPU0 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Upf1Q9EPU0 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Upf1Q9EPU0 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Upf1Q9EPU0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Upf1Q9EPU0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Upf1Q9EPU0 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Upf1Q9EPU0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Upf1Q9EPU0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Upf1Q9EPU0 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Upf1Q9EPU0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Upf1Q9EPU0 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
Upf1Q9EPU0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC20.75■□□□□ 0.91
Upf1Q9EPU0 Gm6736-201ENSMUST00000166583 948 ntBASIC20.75■□□□□ 0.91
Upf1Q9EPU0 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Upf1Q9EPU0 Ighv6-1-201ENSMUST00000193612 343 ntBASIC20.75■□□□□ 0.91
Upf1Q9EPU0 Gm43575-201ENSMUST00000196420 516 ntBASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms