Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.39■□□□□ 0.7
Gtf3c6Q9D8P7 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Gtf3c6Q9D8P7 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gtf3c6Q9D8P7 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gtf3c6Q9D8P7 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gtf3c6Q9D8P7 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.39■□□□□ 0.69
Gtf3c6Q9D8P7 Gm42569-201ENSMUST00000200539 472 ntBASIC19.39■□□□□ 0.69
Gtf3c6Q9D8P7 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gtf3c6Q9D8P7 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gtf3c6Q9D8P7 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gtf3c6Q9D8P7 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gtf3c6Q9D8P7 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.39■□□□□ 0.69
Gtf3c6Q9D8P7 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gtf3c6Q9D8P7 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gtf3c6Q9D8P7 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gtf3c6Q9D8P7 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gtf3c6Q9D8P7 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gtf3c6Q9D8P7 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gtf3c6Q9D8P7 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Gtf3c6Q9D8P7 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gtf3c6Q9D8P7 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Gtf3c6Q9D8P7 Gm6365-201ENSMUST00000054711 744 ntBASIC19.38■□□□□ 0.69
Gtf3c6Q9D8P7 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gtf3c6Q9D8P7 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gtf3c6Q9D8P7 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Gtf3c6Q9D8P7 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gtf3c6Q9D8P7 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gtf3c6Q9D8P7 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.37■□□□□ 0.69
Gtf3c6Q9D8P7 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Gtf3c6Q9D8P7 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Gtf3c6Q9D8P7 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gtf3c6Q9D8P7 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Gtf3c6Q9D8P7 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Gtf3c6Q9D8P7 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Gtf3c6Q9D8P7 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gtf3c6Q9D8P7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.37■□□□□ 0.69
Gtf3c6Q9D8P7 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.37■□□□□ 0.69
Gtf3c6Q9D8P7 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gtf3c6Q9D8P7 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gtf3c6Q9D8P7 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gtf3c6Q9D8P7 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gtf3c6Q9D8P7 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gtf3c6Q9D8P7 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Gtf3c6Q9D8P7 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.36■□□□□ 0.69
Gtf3c6Q9D8P7 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gtf3c6Q9D8P7 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gtf3c6Q9D8P7 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gtf3c6Q9D8P7 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.36■□□□□ 0.69
Gtf3c6Q9D8P7 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gtf3c6Q9D8P7 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gtf3c6Q9D8P7 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gtf3c6Q9D8P7 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Gtf3c6Q9D8P7 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gtf3c6Q9D8P7 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Gtf3c6Q9D8P7 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.36■□□□□ 0.69
Gtf3c6Q9D8P7 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gtf3c6Q9D8P7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.36■□□□□ 0.69
Gtf3c6Q9D8P7 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.36■□□□□ 0.69
Gtf3c6Q9D8P7 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.36■□□□□ 0.69
Gtf3c6Q9D8P7 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gtf3c6Q9D8P7 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gtf3c6Q9D8P7 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gtf3c6Q9D8P7 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC19.35■□□□□ 0.69
Gtf3c6Q9D8P7 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gtf3c6Q9D8P7 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.35■□□□□ 0.69
Gtf3c6Q9D8P7 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gtf3c6Q9D8P7 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
Gtf3c6Q9D8P7 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gtf3c6Q9D8P7 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.35■□□□□ 0.69
Gtf3c6Q9D8P7 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.35■□□□□ 0.69
Gtf3c6Q9D8P7 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gtf3c6Q9D8P7 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gtf3c6Q9D8P7 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gtf3c6Q9D8P7 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.35■□□□□ 0.69
Gtf3c6Q9D8P7 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gtf3c6Q9D8P7 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gtf3c6Q9D8P7 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gtf3c6Q9D8P7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gtf3c6Q9D8P7 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gtf3c6Q9D8P7 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gtf3c6Q9D8P7 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gtf3c6Q9D8P7 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gtf3c6Q9D8P7 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gtf3c6Q9D8P7 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gtf3c6Q9D8P7 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gtf3c6Q9D8P7 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Gtf3c6Q9D8P7 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gtf3c6Q9D8P7 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.33■□□□□ 0.69
Gtf3c6Q9D8P7 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Gtf3c6Q9D8P7 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gtf3c6Q9D8P7 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gtf3c6Q9D8P7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Gtf3c6Q9D8P7 Gm6211-202ENSMUST00000167849 925 ntBASIC19.33■□□□□ 0.68
Gtf3c6Q9D8P7 Gm27405-201ENSMUST00000184201 112 ntBASIC19.33■□□□□ 0.68
Gtf3c6Q9D8P7 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.33■□□□□ 0.68
Gtf3c6Q9D8P7 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Gtf3c6Q9D8P7 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Gtf3c6Q9D8P7 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Gtf3c6Q9D8P7 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gtf3c6Q9D8P7 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms