Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chaf1bQ9D0N7 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.11■□□□□ 0.33
Chaf1bQ9D0N7 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chaf1bQ9D0N7 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chaf1bQ9D0N7 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Chaf1bQ9D0N7 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chaf1bQ9D0N7 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.11■□□□□ 0.33
Chaf1bQ9D0N7 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Chaf1bQ9D0N7 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chaf1bQ9D0N7 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chaf1bQ9D0N7 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Chaf1bQ9D0N7 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chaf1bQ9D0N7 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Chaf1bQ9D0N7 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chaf1bQ9D0N7 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chaf1bQ9D0N7 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Chaf1bQ9D0N7 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Chaf1bQ9D0N7 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.1■□□□□ 0.33
Chaf1bQ9D0N7 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Chaf1bQ9D0N7 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chaf1bQ9D0N7 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chaf1bQ9D0N7 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Chaf1bQ9D0N7 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chaf1bQ9D0N7 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chaf1bQ9D0N7 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Chaf1bQ9D0N7 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chaf1bQ9D0N7 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chaf1bQ9D0N7 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.1■□□□□ 0.33
Chaf1bQ9D0N7 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chaf1bQ9D0N7 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chaf1bQ9D0N7 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chaf1bQ9D0N7 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
Chaf1bQ9D0N7 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chaf1bQ9D0N7 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chaf1bQ9D0N7 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chaf1bQ9D0N7 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chaf1bQ9D0N7 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Chaf1bQ9D0N7 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Chaf1bQ9D0N7 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.09■□□□□ 0.33
Chaf1bQ9D0N7 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.09■□□□□ 0.33
Chaf1bQ9D0N7 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chaf1bQ9D0N7 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Chaf1bQ9D0N7 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chaf1bQ9D0N7 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chaf1bQ9D0N7 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chaf1bQ9D0N7 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chaf1bQ9D0N7 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chaf1bQ9D0N7 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chaf1bQ9D0N7 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chaf1bQ9D0N7 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chaf1bQ9D0N7 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.09■□□□□ 0.33
Chaf1bQ9D0N7 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Chaf1bQ9D0N7 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chaf1bQ9D0N7 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chaf1bQ9D0N7 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.08■□□□□ 0.33
Chaf1bQ9D0N7 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chaf1bQ9D0N7 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chaf1bQ9D0N7 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chaf1bQ9D0N7 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Chaf1bQ9D0N7 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chaf1bQ9D0N7 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Chaf1bQ9D0N7 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.08■□□□□ 0.32
Chaf1bQ9D0N7 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.08■□□□□ 0.32
Chaf1bQ9D0N7 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.08■□□□□ 0.32
Chaf1bQ9D0N7 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chaf1bQ9D0N7 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Chaf1bQ9D0N7 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chaf1bQ9D0N7 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chaf1bQ9D0N7 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.08■□□□□ 0.32
Chaf1bQ9D0N7 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chaf1bQ9D0N7 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chaf1bQ9D0N7 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Chaf1bQ9D0N7 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chaf1bQ9D0N7 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chaf1bQ9D0N7 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chaf1bQ9D0N7 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chaf1bQ9D0N7 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chaf1bQ9D0N7 Gm11421-201ENSMUST00000122124 294 ntBASIC17.07■□□□□ 0.32
Chaf1bQ9D0N7 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.07■□□□□ 0.32
Chaf1bQ9D0N7 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.07■□□□□ 0.32
Chaf1bQ9D0N7 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.07■□□□□ 0.32
Chaf1bQ9D0N7 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chaf1bQ9D0N7 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chaf1bQ9D0N7 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Chaf1bQ9D0N7 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chaf1bQ9D0N7 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.07■□□□□ 0.32
Chaf1bQ9D0N7 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chaf1bQ9D0N7 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Chaf1bQ9D0N7 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chaf1bQ9D0N7 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chaf1bQ9D0N7 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chaf1bQ9D0N7 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chaf1bQ9D0N7 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chaf1bQ9D0N7 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chaf1bQ9D0N7 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Chaf1bQ9D0N7 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Chaf1bQ9D0N7 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chaf1bQ9D0N7 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.06■□□□□ 0.32
Chaf1bQ9D0N7 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Chaf1bQ9D0N7 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms