Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.91■□□□□ 0.62
Rnf135Q9CWS1 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf135Q9CWS1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.91■□□□□ 0.62
Rnf135Q9CWS1 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf135Q9CWS1 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.91■□□□□ 0.62
Rnf135Q9CWS1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf135Q9CWS1 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf135Q9CWS1 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.91■□□□□ 0.62
Rnf135Q9CWS1 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Rnf135Q9CWS1 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf135Q9CWS1 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf135Q9CWS1 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf135Q9CWS1 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf135Q9CWS1 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.91■□□□□ 0.62
Rnf135Q9CWS1 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf135Q9CWS1 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf135Q9CWS1 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf135Q9CWS1 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.9■□□□□ 0.62
Rnf135Q9CWS1 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf135Q9CWS1 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf135Q9CWS1 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.9■□□□□ 0.62
Rnf135Q9CWS1 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf135Q9CWS1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Rnf135Q9CWS1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Rnf135Q9CWS1 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.9■□□□□ 0.62
Rnf135Q9CWS1 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.9■□□□□ 0.62
Rnf135Q9CWS1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.9■□□□□ 0.62
Rnf135Q9CWS1 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.9■□□□□ 0.62
Rnf135Q9CWS1 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.9■□□□□ 0.62
Rnf135Q9CWS1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf135Q9CWS1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf135Q9CWS1 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf135Q9CWS1 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Rnf135Q9CWS1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rnf135Q9CWS1 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf135Q9CWS1 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.89■□□□□ 0.61
Rnf135Q9CWS1 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf135Q9CWS1 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf135Q9CWS1 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
Rnf135Q9CWS1 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf135Q9CWS1 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf135Q9CWS1 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.89■□□□□ 0.61
Rnf135Q9CWS1 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf135Q9CWS1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf135Q9CWS1 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf135Q9CWS1 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Rnf135Q9CWS1 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf135Q9CWS1 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf135Q9CWS1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf135Q9CWS1 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf135Q9CWS1 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf135Q9CWS1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf135Q9CWS1 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Rnf135Q9CWS1 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.88■□□□□ 0.61
Rnf135Q9CWS1 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf135Q9CWS1 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.88■□□□□ 0.61
Rnf135Q9CWS1 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rnf135Q9CWS1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Rnf135Q9CWS1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf135Q9CWS1 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Rnf135Q9CWS1 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Rnf135Q9CWS1 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
Rnf135Q9CWS1 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf135Q9CWS1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Rnf135Q9CWS1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Rnf135Q9CWS1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Rnf135Q9CWS1 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf135Q9CWS1 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf135Q9CWS1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf135Q9CWS1 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf135Q9CWS1 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf135Q9CWS1 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf135Q9CWS1 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Rnf135Q9CWS1 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf135Q9CWS1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Rnf135Q9CWS1 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf135Q9CWS1 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Rnf135Q9CWS1 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf135Q9CWS1 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf135Q9CWS1 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf135Q9CWS1 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.86■□□□□ 0.61
Rnf135Q9CWS1 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf135Q9CWS1 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Rnf135Q9CWS1 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Rnf135Q9CWS1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf135Q9CWS1 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.86■□□□□ 0.61
Rnf135Q9CWS1 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Rnf135Q9CWS1 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf135Q9CWS1 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf135Q9CWS1 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf135Q9CWS1 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf135Q9CWS1 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf135Q9CWS1 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf135Q9CWS1 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf135Q9CWS1 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf135Q9CWS1 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Rnf135Q9CWS1 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf135Q9CWS1 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf135Q9CWS1 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf135Q9CWS1 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms