Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Otud1Q9CUB6 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Otud1Q9CUB6 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Otud1Q9CUB6 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Otud1Q9CUB6 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Otud1Q9CUB6 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.17■□□□□ 0.34
Otud1Q9CUB6 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Otud1Q9CUB6 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Otud1Q9CUB6 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Otud1Q9CUB6 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Otud1Q9CUB6 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Otud1Q9CUB6 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Otud1Q9CUB6 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Otud1Q9CUB6 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Otud1Q9CUB6 Flg-201ENSMUST00000050758 1488 ntBASIC17.17■□□□□ 0.34
Otud1Q9CUB6 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Otud1Q9CUB6 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.17■□□□□ 0.34
Otud1Q9CUB6 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
Otud1Q9CUB6 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Otud1Q9CUB6 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Otud1Q9CUB6 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Otud1Q9CUB6 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Otud1Q9CUB6 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Otud1Q9CUB6 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Otud1Q9CUB6 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Otud1Q9CUB6 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Otud1Q9CUB6 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.16■□□□□ 0.34
Otud1Q9CUB6 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.16■□□□□ 0.34
Otud1Q9CUB6 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.16■□□□□ 0.34
Otud1Q9CUB6 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.16■□□□□ 0.34
Otud1Q9CUB6 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Otud1Q9CUB6 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.16■□□□□ 0.34
Otud1Q9CUB6 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Otud1Q9CUB6 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Otud1Q9CUB6 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Otud1Q9CUB6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Otud1Q9CUB6 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Otud1Q9CUB6 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Otud1Q9CUB6 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.15■□□□□ 0.34
Otud1Q9CUB6 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Otud1Q9CUB6 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Otud1Q9CUB6 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Otud1Q9CUB6 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Otud1Q9CUB6 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Otud1Q9CUB6 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Otud1Q9CUB6 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Otud1Q9CUB6 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Otud1Q9CUB6 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Otud1Q9CUB6 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
Otud1Q9CUB6 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.14■□□□□ 0.34
Otud1Q9CUB6 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Otud1Q9CUB6 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.14■□□□□ 0.33
Otud1Q9CUB6 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.14■□□□□ 0.33
Otud1Q9CUB6 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Otud1Q9CUB6 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Otud1Q9CUB6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Otud1Q9CUB6 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Otud1Q9CUB6 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Otud1Q9CUB6 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Otud1Q9CUB6 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.14■□□□□ 0.33
Otud1Q9CUB6 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Otud1Q9CUB6 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.14■□□□□ 0.33
Otud1Q9CUB6 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Otud1Q9CUB6 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Otud1Q9CUB6 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Otud1Q9CUB6 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Otud1Q9CUB6 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Otud1Q9CUB6 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Otud1Q9CUB6 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Otud1Q9CUB6 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
Otud1Q9CUB6 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Otud1Q9CUB6 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Otud1Q9CUB6 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Otud1Q9CUB6 Zfp783-201ENSMUST00000095946 670 ntBASIC17.13■□□□□ 0.33
Otud1Q9CUB6 Gm10812-201ENSMUST00000099864 546 ntBASIC17.13■□□□□ 0.33
Otud1Q9CUB6 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.13■□□□□ 0.33
Otud1Q9CUB6 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.13■□□□□ 0.33
Otud1Q9CUB6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Otud1Q9CUB6 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.13■□□□□ 0.33
Otud1Q9CUB6 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Otud1Q9CUB6 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Otud1Q9CUB6 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.12■□□□□ 0.33
Otud1Q9CUB6 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Otud1Q9CUB6 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Otud1Q9CUB6 Gm10698-201ENSMUST00000182663 604 ntBASIC17.12■□□□□ 0.33
Otud1Q9CUB6 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.12■□□□□ 0.33
Otud1Q9CUB6 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Otud1Q9CUB6 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Otud1Q9CUB6 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Otud1Q9CUB6 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Otud1Q9CUB6 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.12■□□□□ 0.33
Otud1Q9CUB6 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.12■□□□□ 0.33
Otud1Q9CUB6 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Otud1Q9CUB6 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Otud1Q9CUB6 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Otud1Q9CUB6 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Otud1Q9CUB6 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Otud1Q9CUB6 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Otud1Q9CUB6 Gm13158-201ENSMUST00000122007 736 ntBASIC17.11■□□□□ 0.33
Otud1Q9CUB6 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms