Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Cdh23Q99PF4 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh23Q99PF4 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.69■□□□□ 0.58
Cdh23Q99PF4 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh23Q99PF4 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Cdh23Q99PF4 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh23Q99PF4 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh23Q99PF4 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Cdh23Q99PF4 Gm29518-201ENSMUST00000190858 372 ntBASIC18.68■□□□□ 0.58
Cdh23Q99PF4 Gm12085-201ENSMUST00000119263 940 ntBASIC18.68■□□□□ 0.58
Cdh23Q99PF4 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.68■□□□□ 0.58
Cdh23Q99PF4 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.68■□□□□ 0.58
Cdh23Q99PF4 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.68■□□□□ 0.58
Cdh23Q99PF4 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Cdh23Q99PF4 Gm34391-201ENSMUST00000203706 907 ntBASIC18.68■□□□□ 0.58
Cdh23Q99PF4 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cdh23Q99PF4 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cdh23Q99PF4 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Cdh23Q99PF4 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.67■□□□□ 0.58
Cdh23Q99PF4 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh23Q99PF4 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh23Q99PF4 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.67■□□□□ 0.58
Cdh23Q99PF4 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh23Q99PF4 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.67■□□□□ 0.58
Cdh23Q99PF4 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh23Q99PF4 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.67■□□□□ 0.58
Cdh23Q99PF4 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.67■□□□□ 0.58
Cdh23Q99PF4 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh23Q99PF4 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh23Q99PF4 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh23Q99PF4 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh23Q99PF4 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.66■□□□□ 0.58
Cdh23Q99PF4 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Cdh23Q99PF4 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh23Q99PF4 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh23Q99PF4 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Cdh23Q99PF4 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh23Q99PF4 Gm24589-201ENSMUST00000116692 94 ntBASIC18.66■□□□□ 0.58
Cdh23Q99PF4 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.66■□□□□ 0.58
Cdh23Q99PF4 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Cdh23Q99PF4 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh23Q99PF4 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh23Q99PF4 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh23Q99PF4 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh23Q99PF4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Cdh23Q99PF4 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh23Q99PF4 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh23Q99PF4 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh23Q99PF4 Gm5587-201ENSMUST00000206270 674 ntBASIC18.65■□□□□ 0.58
Cdh23Q99PF4 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.65■□□□□ 0.58
Cdh23Q99PF4 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh23Q99PF4 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh23Q99PF4 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh23Q99PF4 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh23Q99PF4 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Cdh23Q99PF4 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.65■□□□□ 0.58
Cdh23Q99PF4 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh23Q99PF4 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh23Q99PF4 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Cdh23Q99PF4 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.65■□□□□ 0.58
Cdh23Q99PF4 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.64■□□□□ 0.58
Cdh23Q99PF4 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
Cdh23Q99PF4 Gm18115-201ENSMUST00000221209 621 ntBASIC18.64■□□□□ 0.58
Cdh23Q99PF4 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cdh23Q99PF4 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdh23Q99PF4 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.64■□□□□ 0.57
Cdh23Q99PF4 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdh23Q99PF4 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.64■□□□□ 0.57
Cdh23Q99PF4 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.64■□□□□ 0.57
Cdh23Q99PF4 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdh23Q99PF4 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdh23Q99PF4 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdh23Q99PF4 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.63■□□□□ 0.57
Cdh23Q99PF4 Mir5130-201ENSMUST00000175160 84 ntBASIC18.63■□□□□ 0.57
Cdh23Q99PF4 Gm6443-201ENSMUST00000203599 874 ntBASIC18.63■□□□□ 0.57
Cdh23Q99PF4 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cdh23Q99PF4 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.63■□□□□ 0.57
Cdh23Q99PF4 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Cdh23Q99PF4 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdh23Q99PF4 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cdh23Q99PF4 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdh23Q99PF4 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Cdh23Q99PF4 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh23Q99PF4 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Cdh23Q99PF4 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Cdh23Q99PF4 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh23Q99PF4 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.62■□□□□ 0.57
Cdh23Q99PF4 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh23Q99PF4 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Cdh23Q99PF4 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh23Q99PF4 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh23Q99PF4 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh23Q99PF4 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
Cdh23Q99PF4 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh23Q99PF4 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.61■□□□□ 0.57
Cdh23Q99PF4 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Cdh23Q99PF4 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh23Q99PF4 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh23Q99PF4 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh23Q99PF4 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms