Protein–RNA interactions for Protein: Q96EQ9

Prdm9, Histone-lysine N-methyltransferase PRDM9, mousemouse

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm9Q96EQ9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Prdm9Q96EQ9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prdm9Q96EQ9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prdm9Q96EQ9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Prdm9Q96EQ9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.91■□□□□ 0.46
Prdm9Q96EQ9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.91■□□□□ 0.46
Prdm9Q96EQ9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prdm9Q96EQ9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prdm9Q96EQ9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Prdm9Q96EQ9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prdm9Q96EQ9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prdm9Q96EQ9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prdm9Q96EQ9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prdm9Q96EQ9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.9■□□□□ 0.46
Prdm9Q96EQ9 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Prdm9Q96EQ9 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.9■□□□□ 0.46
Prdm9Q96EQ9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Prdm9Q96EQ9 Gm10698-201ENSMUST00000182663 604 ntBASIC17.9■□□□□ 0.46
Prdm9Q96EQ9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.9■□□□□ 0.46
Prdm9Q96EQ9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.9■□□□□ 0.46
Prdm9Q96EQ9 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prdm9Q96EQ9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.9■□□□□ 0.46
Prdm9Q96EQ9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Prdm9Q96EQ9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Prdm9Q96EQ9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prdm9Q96EQ9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prdm9Q96EQ9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Prdm9Q96EQ9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prdm9Q96EQ9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prdm9Q96EQ9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prdm9Q96EQ9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Prdm9Q96EQ9 Gm15378-201ENSMUST00000121894 207 ntBASIC17.89■□□□□ 0.45
Prdm9Q96EQ9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.89■□□□□ 0.45
Prdm9Q96EQ9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Prdm9Q96EQ9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
Prdm9Q96EQ9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Prdm9Q96EQ9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.89■□□□□ 0.45
Prdm9Q96EQ9 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.88■□□□□ 0.45
Prdm9Q96EQ9 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prdm9Q96EQ9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prdm9Q96EQ9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prdm9Q96EQ9 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prdm9Q96EQ9 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.88■□□□□ 0.45
Prdm9Q96EQ9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prdm9Q96EQ9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prdm9Q96EQ9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.88■□□□□ 0.45
Prdm9Q96EQ9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Prdm9Q96EQ9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prdm9Q96EQ9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prdm9Q96EQ9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Prdm9Q96EQ9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.87■□□□□ 0.45
Prdm9Q96EQ9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Prdm9Q96EQ9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.87■□□□□ 0.45
Prdm9Q96EQ9 Gm10138-203ENSMUST00000206952 366 ntBASIC17.87■□□□□ 0.45
Prdm9Q96EQ9 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prdm9Q96EQ9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prdm9Q96EQ9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prdm9Q96EQ9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Prdm9Q96EQ9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Prdm9Q96EQ9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.87■□□□□ 0.45
Prdm9Q96EQ9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prdm9Q96EQ9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prdm9Q96EQ9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prdm9Q96EQ9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Prdm9Q96EQ9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prdm9Q96EQ9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Prdm9Q96EQ9 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.86■□□□□ 0.45
Prdm9Q96EQ9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Prdm9Q96EQ9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prdm9Q96EQ9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prdm9Q96EQ9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Prdm9Q96EQ9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.86■□□□□ 0.45
Prdm9Q96EQ9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Prdm9Q96EQ9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prdm9Q96EQ9 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.86■□□□□ 0.45
Prdm9Q96EQ9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Prdm9Q96EQ9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prdm9Q96EQ9 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.85■□□□□ 0.45
Prdm9Q96EQ9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Prdm9Q96EQ9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Prdm9Q96EQ9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prdm9Q96EQ9 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.85■□□□□ 0.45
Prdm9Q96EQ9 Gm10252-201ENSMUST00000209541 832 ntBASIC17.85■□□□□ 0.45
Prdm9Q96EQ9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.85■□□□□ 0.45
Prdm9Q96EQ9 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prdm9Q96EQ9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prdm9Q96EQ9 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prdm9Q96EQ9 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Prdm9Q96EQ9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prdm9Q96EQ9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Prdm9Q96EQ9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prdm9Q96EQ9 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.84■□□□□ 0.45
Prdm9Q96EQ9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prdm9Q96EQ9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.84■□□□□ 0.45
Prdm9Q96EQ9 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.84■□□□□ 0.45
Prdm9Q96EQ9 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prdm9Q96EQ9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prdm9Q96EQ9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prdm9Q96EQ9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Prdm9Q96EQ9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms