Protein–RNA interactions for Protein: Q8R0W1

Cipc, CLOCK-interacting pacemaker, mousemouse

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CipcQ8R0W1 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CipcQ8R0W1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CipcQ8R0W1 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CipcQ8R0W1 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CipcQ8R0W1 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CipcQ8R0W1 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.19■□□□□ 0.34
CipcQ8R0W1 Rab3c-203ENSMUST00000224180 967 ntBASIC17.19■□□□□ 0.34
CipcQ8R0W1 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.19■□□□□ 0.34
CipcQ8R0W1 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CipcQ8R0W1 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CipcQ8R0W1 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CipcQ8R0W1 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CipcQ8R0W1 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CipcQ8R0W1 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CipcQ8R0W1 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.19■□□□□ 0.34
CipcQ8R0W1 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CipcQ8R0W1 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.18■□□□□ 0.34
CipcQ8R0W1 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CipcQ8R0W1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CipcQ8R0W1 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CipcQ8R0W1 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CipcQ8R0W1 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CipcQ8R0W1 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CipcQ8R0W1 Gm26524-201ENSMUST00000192339 390 ntBASIC17.18■□□□□ 0.34
CipcQ8R0W1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.18■□□□□ 0.34
CipcQ8R0W1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CipcQ8R0W1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CipcQ8R0W1 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CipcQ8R0W1 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CipcQ8R0W1 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CipcQ8R0W1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CipcQ8R0W1 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CipcQ8R0W1 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CipcQ8R0W1 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CipcQ8R0W1 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CipcQ8R0W1 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.17■□□□□ 0.34
CipcQ8R0W1 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CipcQ8R0W1 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CipcQ8R0W1 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.17■□□□□ 0.34
CipcQ8R0W1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CipcQ8R0W1 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CipcQ8R0W1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.17■□□□□ 0.34
CipcQ8R0W1 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.17■□□□□ 0.34
CipcQ8R0W1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.17■□□□□ 0.34
CipcQ8R0W1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CipcQ8R0W1 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CipcQ8R0W1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CipcQ8R0W1 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CipcQ8R0W1 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CipcQ8R0W1 Gm10653-202ENSMUST00000139570 835 ntBASIC17.16■□□□□ 0.34
CipcQ8R0W1 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.16■□□□□ 0.34
CipcQ8R0W1 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CipcQ8R0W1 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.16■□□□□ 0.34
CipcQ8R0W1 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CipcQ8R0W1 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CipcQ8R0W1 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CipcQ8R0W1 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CipcQ8R0W1 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CipcQ8R0W1 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.16■□□□□ 0.34
CipcQ8R0W1 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CipcQ8R0W1 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CipcQ8R0W1 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CipcQ8R0W1 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CipcQ8R0W1 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CipcQ8R0W1 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CipcQ8R0W1 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CipcQ8R0W1 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CipcQ8R0W1 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.15■□□□□ 0.34
CipcQ8R0W1 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CipcQ8R0W1 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CipcQ8R0W1 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CipcQ8R0W1 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CipcQ8R0W1 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CipcQ8R0W1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CipcQ8R0W1 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CipcQ8R0W1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CipcQ8R0W1 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CipcQ8R0W1 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CipcQ8R0W1 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
CipcQ8R0W1 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CipcQ8R0W1 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CipcQ8R0W1 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CipcQ8R0W1 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CipcQ8R0W1 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.14■□□□□ 0.33
CipcQ8R0W1 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CipcQ8R0W1 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CipcQ8R0W1 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CipcQ8R0W1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CipcQ8R0W1 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.14■□□□□ 0.33
CipcQ8R0W1 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CipcQ8R0W1 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CipcQ8R0W1 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CipcQ8R0W1 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CipcQ8R0W1 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CipcQ8R0W1 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
CipcQ8R0W1 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CipcQ8R0W1 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.14■□□□□ 0.33
CipcQ8R0W1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CipcQ8R0W1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CipcQ8R0W1 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms