Protein–RNA interactions for Protein: Q8K1J6

Trnt1, CCA tRNA nucleotidyltransferase 1, mitochondrial, mousemouse

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnt1Q8K1J6 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trnt1Q8K1J6 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trnt1Q8K1J6 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trnt1Q8K1J6 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trnt1Q8K1J6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trnt1Q8K1J6 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.59■□□□□ 0.41
Trnt1Q8K1J6 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trnt1Q8K1J6 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trnt1Q8K1J6 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Trnt1Q8K1J6 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trnt1Q8K1J6 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trnt1Q8K1J6 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trnt1Q8K1J6 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trnt1Q8K1J6 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trnt1Q8K1J6 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trnt1Q8K1J6 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trnt1Q8K1J6 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trnt1Q8K1J6 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.59■□□□□ 0.41
Trnt1Q8K1J6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Trnt1Q8K1J6 Gm6211-202ENSMUST00000167849 925 ntBASIC17.59■□□□□ 0.41
Trnt1Q8K1J6 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trnt1Q8K1J6 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trnt1Q8K1J6 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trnt1Q8K1J6 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.59■□□□□ 0.41
Trnt1Q8K1J6 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trnt1Q8K1J6 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Trnt1Q8K1J6 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trnt1Q8K1J6 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Trnt1Q8K1J6 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trnt1Q8K1J6 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trnt1Q8K1J6 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trnt1Q8K1J6 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trnt1Q8K1J6 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trnt1Q8K1J6 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trnt1Q8K1J6 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Trnt1Q8K1J6 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trnt1Q8K1J6 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.58■□□□□ 0.4
Trnt1Q8K1J6 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trnt1Q8K1J6 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.58■□□□□ 0.4
Trnt1Q8K1J6 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Trnt1Q8K1J6 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trnt1Q8K1J6 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.58■□□□□ 0.4
Trnt1Q8K1J6 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trnt1Q8K1J6 Tgds-204ENSMUST00000228543 1594 ntBASIC17.57■□□□□ 0.4
Trnt1Q8K1J6 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trnt1Q8K1J6 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.57■□□□□ 0.4
Trnt1Q8K1J6 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Trnt1Q8K1J6 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trnt1Q8K1J6 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trnt1Q8K1J6 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.57■□□□□ 0.4
Trnt1Q8K1J6 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trnt1Q8K1J6 Gm7291-201ENSMUST00000199147 382 ntBASIC17.57■□□□□ 0.4
Trnt1Q8K1J6 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trnt1Q8K1J6 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trnt1Q8K1J6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trnt1Q8K1J6 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trnt1Q8K1J6 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.57■□□□□ 0.4
Trnt1Q8K1J6 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trnt1Q8K1J6 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trnt1Q8K1J6 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trnt1Q8K1J6 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trnt1Q8K1J6 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trnt1Q8K1J6 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trnt1Q8K1J6 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trnt1Q8K1J6 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trnt1Q8K1J6 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trnt1Q8K1J6 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trnt1Q8K1J6 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.56■□□□□ 0.4
Trnt1Q8K1J6 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Trnt1Q8K1J6 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.56■□□□□ 0.4
Trnt1Q8K1J6 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trnt1Q8K1J6 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trnt1Q8K1J6 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.56■□□□□ 0.4
Trnt1Q8K1J6 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trnt1Q8K1J6 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trnt1Q8K1J6 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trnt1Q8K1J6 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trnt1Q8K1J6 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trnt1Q8K1J6 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trnt1Q8K1J6 Grk6-206ENSMUST00000224995 2971 ntBASIC17.55■□□□□ 0.4
Trnt1Q8K1J6 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trnt1Q8K1J6 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trnt1Q8K1J6 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.55■□□□□ 0.4
Trnt1Q8K1J6 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trnt1Q8K1J6 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.55■□□□□ 0.4
Trnt1Q8K1J6 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trnt1Q8K1J6 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trnt1Q8K1J6 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trnt1Q8K1J6 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trnt1Q8K1J6 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.55■□□□□ 0.4
Trnt1Q8K1J6 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trnt1Q8K1J6 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trnt1Q8K1J6 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trnt1Q8K1J6 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Trnt1Q8K1J6 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.55■□□□□ 0.4
Trnt1Q8K1J6 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trnt1Q8K1J6 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trnt1Q8K1J6 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trnt1Q8K1J6 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trnt1Q8K1J6 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms