Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.53■□□□□ 0.72
Vcpip1Q8CDG3 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vcpip1Q8CDG3 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.53■□□□□ 0.72
Vcpip1Q8CDG3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vcpip1Q8CDG3 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
Vcpip1Q8CDG3 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.52■□□□□ 0.72
Vcpip1Q8CDG3 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vcpip1Q8CDG3 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vcpip1Q8CDG3 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vcpip1Q8CDG3 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.52■□□□□ 0.72
Vcpip1Q8CDG3 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.52■□□□□ 0.72
Vcpip1Q8CDG3 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vcpip1Q8CDG3 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Vcpip1Q8CDG3 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Vcpip1Q8CDG3 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vcpip1Q8CDG3 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vcpip1Q8CDG3 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vcpip1Q8CDG3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Vcpip1Q8CDG3 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Vcpip1Q8CDG3 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vcpip1Q8CDG3 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vcpip1Q8CDG3 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vcpip1Q8CDG3 Gm18671-201ENSMUST00000214826 683 ntBASIC19.51■□□□□ 0.71
Vcpip1Q8CDG3 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.51■□□□□ 0.71
Vcpip1Q8CDG3 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Vcpip1Q8CDG3 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vcpip1Q8CDG3 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vcpip1Q8CDG3 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Vcpip1Q8CDG3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vcpip1Q8CDG3 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Vcpip1Q8CDG3 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vcpip1Q8CDG3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vcpip1Q8CDG3 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.51■□□□□ 0.71
Vcpip1Q8CDG3 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vcpip1Q8CDG3 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vcpip1Q8CDG3 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vcpip1Q8CDG3 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.5■□□□□ 0.71
Vcpip1Q8CDG3 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vcpip1Q8CDG3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.5■□□□□ 0.71
Vcpip1Q8CDG3 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.5■□□□□ 0.71
Vcpip1Q8CDG3 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vcpip1Q8CDG3 Gm42778-201ENSMUST00000199644 553 ntBASIC19.5■□□□□ 0.71
Vcpip1Q8CDG3 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vcpip1Q8CDG3 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.5■□□□□ 0.71
Vcpip1Q8CDG3 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vcpip1Q8CDG3 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vcpip1Q8CDG3 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vcpip1Q8CDG3 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.5■□□□□ 0.71
Vcpip1Q8CDG3 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vcpip1Q8CDG3 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vcpip1Q8CDG3 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vcpip1Q8CDG3 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vcpip1Q8CDG3 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vcpip1Q8CDG3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vcpip1Q8CDG3 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.49■□□□□ 0.71
Vcpip1Q8CDG3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vcpip1Q8CDG3 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vcpip1Q8CDG3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Vcpip1Q8CDG3 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vcpip1Q8CDG3 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.49■□□□□ 0.71
Vcpip1Q8CDG3 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Vcpip1Q8CDG3 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Vcpip1Q8CDG3 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vcpip1Q8CDG3 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Vcpip1Q8CDG3 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vcpip1Q8CDG3 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vcpip1Q8CDG3 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.48■□□□□ 0.71
Vcpip1Q8CDG3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Vcpip1Q8CDG3 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vcpip1Q8CDG3 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vcpip1Q8CDG3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vcpip1Q8CDG3 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vcpip1Q8CDG3 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vcpip1Q8CDG3 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vcpip1Q8CDG3 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vcpip1Q8CDG3 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.48■□□□□ 0.71
Vcpip1Q8CDG3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vcpip1Q8CDG3 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vcpip1Q8CDG3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vcpip1Q8CDG3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vcpip1Q8CDG3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vcpip1Q8CDG3 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vcpip1Q8CDG3 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vcpip1Q8CDG3 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vcpip1Q8CDG3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vcpip1Q8CDG3 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vcpip1Q8CDG3 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Vcpip1Q8CDG3 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Vcpip1Q8CDG3 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.47■□□□□ 0.71
Vcpip1Q8CDG3 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.47■□□□□ 0.71
Vcpip1Q8CDG3 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.47■□□□□ 0.71
Vcpip1Q8CDG3 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vcpip1Q8CDG3 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Vcpip1Q8CDG3 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vcpip1Q8CDG3 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vcpip1Q8CDG3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vcpip1Q8CDG3 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Vcpip1Q8CDG3 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Vcpip1Q8CDG3 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vcpip1Q8CDG3 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms