Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Alx1Q8C8B0 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Alx1Q8C8B0 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC21.32■■□□□ 1
Alx1Q8C8B0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Alx1Q8C8B0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Alx1Q8C8B0 Alkbh1-212ENSMUST00000185301 408 ntBASIC21.32■■□□□ 1
Alx1Q8C8B0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Alx1Q8C8B0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC21.32■■□□□ 1
Alx1Q8C8B0 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Alx1Q8C8B0 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC21.32■■□□□ 1
Alx1Q8C8B0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Alx1Q8C8B0 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Alx1Q8C8B0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC21.32■■□□□ 1
Alx1Q8C8B0 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Alx1Q8C8B0 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Alx1Q8C8B0 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Alx1Q8C8B0 Gm13158-201ENSMUST00000122007 736 ntBASIC21.31■■□□□ 1
Alx1Q8C8B0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC21.31■■□□□ 1
Alx1Q8C8B0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Alx1Q8C8B0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Alx1Q8C8B0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC21.3■■□□□ 1
Alx1Q8C8B0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.3■■□□□ 1
Alx1Q8C8B0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Alx1Q8C8B0 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Alx1Q8C8B0 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Alx1Q8C8B0 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Alx1Q8C8B0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
Alx1Q8C8B0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC21.29■■□□□ 1
Alx1Q8C8B0 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Alx1Q8C8B0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Alx1Q8C8B0 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Alx1Q8C8B0 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Alx1Q8C8B0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Alx1Q8C8B0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.29■■□□□ 1
Alx1Q8C8B0 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC21.29■■□□□ 1
Alx1Q8C8B0 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Alx1Q8C8B0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Alx1Q8C8B0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Alx1Q8C8B0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Alx1Q8C8B0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC21.28■■□□□ 1
Alx1Q8C8B0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Alx1Q8C8B0 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Alx1Q8C8B0 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21.28■■□□□ 1
Alx1Q8C8B0 AC112142.1-201ENSMUST00000228796 918 ntBASIC21.28■■□□□ 1
Alx1Q8C8B0 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Alx1Q8C8B0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Alx1Q8C8B0 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Alx1Q8C8B0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Alx1Q8C8B0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Alx1Q8C8B0 Gm8520-201ENSMUST00000186517 868 ntBASIC21.27■■□□□ 1
Alx1Q8C8B0 Gm18666-201ENSMUST00000190039 958 ntBASIC21.27■■□□□ 1
Alx1Q8C8B0 Gm10138-203ENSMUST00000206952 366 ntBASIC21.27■■□□□ 1
Alx1Q8C8B0 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
Alx1Q8C8B0 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Alx1Q8C8B0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Alx1Q8C8B0 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Alx1Q8C8B0 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Alx1Q8C8B0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Alx1Q8C8B0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Alx1Q8C8B0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.26■□□□□ 0.99
Alx1Q8C8B0 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Alx1Q8C8B0 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Alx1Q8C8B0 Gm13168-201ENSMUST00000121771 632 ntBASIC21.26■□□□□ 0.99
Alx1Q8C8B0 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Alx1Q8C8B0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Alx1Q8C8B0 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Alx1Q8C8B0 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Alx1Q8C8B0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Alx1Q8C8B0 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Alx1Q8C8B0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Alx1Q8C8B0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Alx1Q8C8B0 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Alx1Q8C8B0 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Alx1Q8C8B0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Alx1Q8C8B0 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Alx1Q8C8B0 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Alx1Q8C8B0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Alx1Q8C8B0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Alx1Q8C8B0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Alx1Q8C8B0 H2-K2-201ENSMUST00000174250 1049 ntBASIC21.24■□□□□ 0.99
Alx1Q8C8B0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Alx1Q8C8B0 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Alx1Q8C8B0 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Alx1Q8C8B0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Alx1Q8C8B0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Alx1Q8C8B0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Alx1Q8C8B0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.23■□□□□ 0.99
Alx1Q8C8B0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
Alx1Q8C8B0 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Alx1Q8C8B0 Nrn1-203ENSMUST00000223611 1443 ntBASIC21.23■□□□□ 0.99
Alx1Q8C8B0 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC21.23■□□□□ 0.99
Alx1Q8C8B0 Mir2861-201ENSMUST00000175539 82 ntBASIC21.23■□□□□ 0.99
Alx1Q8C8B0 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC21.23■□□□□ 0.99
Alx1Q8C8B0 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC21.23■□□□□ 0.99
Alx1Q8C8B0 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Alx1Q8C8B0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Alx1Q8C8B0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Alx1Q8C8B0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Alx1Q8C8B0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Alx1Q8C8B0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms