Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Cpne3Q8BT60 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Cpne3Q8BT60 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cpne3Q8BT60 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Cpne3Q8BT60 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Cpne3Q8BT60 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpne3Q8BT60 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cpne3Q8BT60 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.59■□□□□ 0.41
Cpne3Q8BT60 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cpne3Q8BT60 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.58■□□□□ 0.41
Cpne3Q8BT60 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cpne3Q8BT60 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cpne3Q8BT60 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.58■□□□□ 0.4
Cpne3Q8BT60 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cpne3Q8BT60 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Cpne3Q8BT60 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cpne3Q8BT60 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Cpne3Q8BT60 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cpne3Q8BT60 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cpne3Q8BT60 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.57■□□□□ 0.4
Cpne3Q8BT60 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpne3Q8BT60 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpne3Q8BT60 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cpne3Q8BT60 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cpne3Q8BT60 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cpne3Q8BT60 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cpne3Q8BT60 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.57■□□□□ 0.4
Cpne3Q8BT60 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.57■□□□□ 0.4
Cpne3Q8BT60 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpne3Q8BT60 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpne3Q8BT60 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpne3Q8BT60 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cpne3Q8BT60 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpne3Q8BT60 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.56■□□□□ 0.4
Cpne3Q8BT60 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cpne3Q8BT60 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpne3Q8BT60 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cpne3Q8BT60 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpne3Q8BT60 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpne3Q8BT60 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpne3Q8BT60 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cpne3Q8BT60 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpne3Q8BT60 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpne3Q8BT60 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.56■□□□□ 0.4
Cpne3Q8BT60 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.56■□□□□ 0.4
Cpne3Q8BT60 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.56■□□□□ 0.4
Cpne3Q8BT60 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cpne3Q8BT60 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpne3Q8BT60 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cpne3Q8BT60 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cpne3Q8BT60 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpne3Q8BT60 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cpne3Q8BT60 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpne3Q8BT60 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpne3Q8BT60 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpne3Q8BT60 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.55■□□□□ 0.4
Cpne3Q8BT60 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne3Q8BT60 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne3Q8BT60 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.55■□□□□ 0.4
Cpne3Q8BT60 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne3Q8BT60 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Cpne3Q8BT60 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne3Q8BT60 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne3Q8BT60 Gm13234-201ENSMUST00000120010 747 ntBASIC17.55■□□□□ 0.4
Cpne3Q8BT60 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne3Q8BT60 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne3Q8BT60 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne3Q8BT60 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne3Q8BT60 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne3Q8BT60 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne3Q8BT60 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne3Q8BT60 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne3Q8BT60 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne3Q8BT60 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Cpne3Q8BT60 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cpne3Q8BT60 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpne3Q8BT60 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpne3Q8BT60 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.54■□□□□ 0.4
Cpne3Q8BT60 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpne3Q8BT60 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Cpne3Q8BT60 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpne3Q8BT60 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpne3Q8BT60 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpne3Q8BT60 Gm13146-201ENSMUST00000118508 780 ntBASIC17.54■□□□□ 0.4
Cpne3Q8BT60 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cpne3Q8BT60 Gm42778-201ENSMUST00000199644 553 ntBASIC17.54■□□□□ 0.4
Cpne3Q8BT60 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpne3Q8BT60 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Cpne3Q8BT60 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cpne3Q8BT60 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cpne3Q8BT60 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpne3Q8BT60 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpne3Q8BT60 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpne3Q8BT60 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpne3Q8BT60 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.53■□□□□ 0.4
Cpne3Q8BT60 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpne3Q8BT60 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpne3Q8BT60 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.53■□□□□ 0.4
Cpne3Q8BT60 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpne3Q8BT60 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms