Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Smarcal1Q8BJL0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smarcal1Q8BJL0 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Smarcal1Q8BJL0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smarcal1Q8BJL0 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.39■□□□□ 0.69
Smarcal1Q8BJL0 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.39■□□□□ 0.69
Smarcal1Q8BJL0 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Smarcal1Q8BJL0 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smarcal1Q8BJL0 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Smarcal1Q8BJL0 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smarcal1Q8BJL0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Smarcal1Q8BJL0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcal1Q8BJL0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcal1Q8BJL0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcal1Q8BJL0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Smarcal1Q8BJL0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcal1Q8BJL0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Smarcal1Q8BJL0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.38■□□□□ 0.69
Smarcal1Q8BJL0 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.38■□□□□ 0.69
Smarcal1Q8BJL0 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.38■□□□□ 0.69
Smarcal1Q8BJL0 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.38■□□□□ 0.69
Smarcal1Q8BJL0 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcal1Q8BJL0 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcal1Q8BJL0 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Smarcal1Q8BJL0 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcal1Q8BJL0 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcal1Q8BJL0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcal1Q8BJL0 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcal1Q8BJL0 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcal1Q8BJL0 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcal1Q8BJL0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcal1Q8BJL0 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcal1Q8BJL0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcal1Q8BJL0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcal1Q8BJL0 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcal1Q8BJL0 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.37■□□□□ 0.69
Smarcal1Q8BJL0 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.37■□□□□ 0.69
Smarcal1Q8BJL0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcal1Q8BJL0 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcal1Q8BJL0 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcal1Q8BJL0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcal1Q8BJL0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Smarcal1Q8BJL0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcal1Q8BJL0 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Smarcal1Q8BJL0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcal1Q8BJL0 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcal1Q8BJL0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcal1Q8BJL0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcal1Q8BJL0 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcal1Q8BJL0 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcal1Q8BJL0 Gm3375-201ENSMUST00000203929 796 ntBASIC19.36■□□□□ 0.69
Smarcal1Q8BJL0 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Smarcal1Q8BJL0 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcal1Q8BJL0 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcal1Q8BJL0 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcal1Q8BJL0 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcal1Q8BJL0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcal1Q8BJL0 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.36■□□□□ 0.69
Smarcal1Q8BJL0 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcal1Q8BJL0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcal1Q8BJL0 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcal1Q8BJL0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.36■□□□□ 0.69
Smarcal1Q8BJL0 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Smarcal1Q8BJL0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcal1Q8BJL0 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcal1Q8BJL0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Smarcal1Q8BJL0 Gm13559-201ENSMUST00000120476 863 ntBASIC19.35■□□□□ 0.69
Smarcal1Q8BJL0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcal1Q8BJL0 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcal1Q8BJL0 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcal1Q8BJL0 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcal1Q8BJL0 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcal1Q8BJL0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcal1Q8BJL0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcal1Q8BJL0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcal1Q8BJL0 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.34■□□□□ 0.69
Smarcal1Q8BJL0 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcal1Q8BJL0 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Smarcal1Q8BJL0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Smarcal1Q8BJL0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcal1Q8BJL0 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcal1Q8BJL0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcal1Q8BJL0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Smarcal1Q8BJL0 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcal1Q8BJL0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smarcal1Q8BJL0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Smarcal1Q8BJL0 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smarcal1Q8BJL0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smarcal1Q8BJL0 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Smarcal1Q8BJL0 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Smarcal1Q8BJL0 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smarcal1Q8BJL0 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smarcal1Q8BJL0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.33■□□□□ 0.68
Smarcal1Q8BJL0 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.33■□□□□ 0.68
Smarcal1Q8BJL0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smarcal1Q8BJL0 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Smarcal1Q8BJL0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smarcal1Q8BJL0 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smarcal1Q8BJL0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Smarcal1Q8BJL0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms