Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm5874-201ENSMUST00000096101 508 ntBASIC18.94■□□□□ 0.62
Ccdc40Q8BI79 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc40Q8BI79 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
Ccdc40Q8BI79 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Ccdc40Q8BI79 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc40Q8BI79 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc40Q8BI79 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc40Q8BI79 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc40Q8BI79 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc40Q8BI79 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc40Q8BI79 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc40Q8BI79 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Ccdc40Q8BI79 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc40Q8BI79 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.93■□□□□ 0.62
Ccdc40Q8BI79 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc40Q8BI79 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc40Q8BI79 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc40Q8BI79 Gm10033-202ENSMUST00000211874 928 ntBASIC18.93■□□□□ 0.62
Ccdc40Q8BI79 Gm18671-201ENSMUST00000214826 683 ntBASIC18.93■□□□□ 0.62
Ccdc40Q8BI79 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc40Q8BI79 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc40Q8BI79 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.93■□□□□ 0.62
Ccdc40Q8BI79 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc40Q8BI79 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Ccdc40Q8BI79 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc40Q8BI79 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.92■□□□□ 0.62
Ccdc40Q8BI79 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc40Q8BI79 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc40Q8BI79 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc40Q8BI79 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.92■□□□□ 0.62
Ccdc40Q8BI79 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc40Q8BI79 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc40Q8BI79 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc40Q8BI79 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc40Q8BI79 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc40Q8BI79 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc40Q8BI79 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc40Q8BI79 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.92■□□□□ 0.62
Ccdc40Q8BI79 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc40Q8BI79 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc40Q8BI79 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc40Q8BI79 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc40Q8BI79 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc40Q8BI79 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc40Q8BI79 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc40Q8BI79 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc40Q8BI79 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
Ccdc40Q8BI79 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Ccdc40Q8BI79 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc40Q8BI79 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.91■□□□□ 0.62
Ccdc40Q8BI79 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc40Q8BI79 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc40Q8BI79 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc40Q8BI79 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc40Q8BI79 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.91■□□□□ 0.62
Ccdc40Q8BI79 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc40Q8BI79 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.91■□□□□ 0.62
Ccdc40Q8BI79 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc40Q8BI79 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc40Q8BI79 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Ccdc40Q8BI79 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc40Q8BI79 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc40Q8BI79 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Ccdc40Q8BI79 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc40Q8BI79 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc40Q8BI79 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.9■□□□□ 0.62
Ccdc40Q8BI79 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Ccdc40Q8BI79 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc40Q8BI79 Gm18284-201ENSMUST00000172604 624 ntBASIC18.9■□□□□ 0.62
Ccdc40Q8BI79 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc40Q8BI79 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc40Q8BI79 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Ccdc40Q8BI79 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc40Q8BI79 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Ccdc40Q8BI79 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc40Q8BI79 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc40Q8BI79 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ccdc40Q8BI79 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ccdc40Q8BI79 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ccdc40Q8BI79 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc40Q8BI79 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc40Q8BI79 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Ccdc40Q8BI79 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Ccdc40Q8BI79 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc40Q8BI79 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc40Q8BI79 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.89■□□□□ 0.61
Ccdc40Q8BI79 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.89■□□□□ 0.61
Ccdc40Q8BI79 Gm42642-201ENSMUST00000200683 355 ntBASIC18.89■□□□□ 0.61
Ccdc40Q8BI79 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc40Q8BI79 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Ccdc40Q8BI79 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc40Q8BI79 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc40Q8BI79 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.89■□□□□ 0.61
Ccdc40Q8BI79 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc40Q8BI79 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc40Q8BI79 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.88■□□□□ 0.61
Ccdc40Q8BI79 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc40Q8BI79 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc40Q8BI79 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc40Q8BI79 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms