Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Trim23Q8BGX0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.55■□□□□ 0.4
Trim23Q8BGX0 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.55■□□□□ 0.4
Trim23Q8BGX0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Trim23Q8BGX0 Zfp783-201ENSMUST00000095946 670 ntBASIC17.55■□□□□ 0.4
Trim23Q8BGX0 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim23Q8BGX0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim23Q8BGX0 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trim23Q8BGX0 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim23Q8BGX0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Trim23Q8BGX0 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim23Q8BGX0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim23Q8BGX0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim23Q8BGX0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.54■□□□□ 0.4
Trim23Q8BGX0 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim23Q8BGX0 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim23Q8BGX0 Gm11927-201ENSMUST00000118472 759 ntBASIC17.54■□□□□ 0.4
Trim23Q8BGX0 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim23Q8BGX0 Gm27275-201ENSMUST00000184318 272 ntBASIC17.54■□□□□ 0.4
Trim23Q8BGX0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.54■□□□□ 0.4
Trim23Q8BGX0 Trmt13-210ENSMUST00000198454 880 ntBASIC17.54■□□□□ 0.4
Trim23Q8BGX0 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim23Q8BGX0 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim23Q8BGX0 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim23Q8BGX0 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.53■□□□□ 0.4
Trim23Q8BGX0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Trim23Q8BGX0 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim23Q8BGX0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trim23Q8BGX0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim23Q8BGX0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim23Q8BGX0 Gm38285-201ENSMUST00000192928 922 ntBASIC17.53■□□□□ 0.4
Trim23Q8BGX0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim23Q8BGX0 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim23Q8BGX0 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Trim23Q8BGX0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim23Q8BGX0 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim23Q8BGX0 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trim23Q8BGX0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim23Q8BGX0 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.52■□□□□ 0.4
Trim23Q8BGX0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
Trim23Q8BGX0 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim23Q8BGX0 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.52■□□□□ 0.4
Trim23Q8BGX0 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Trim23Q8BGX0 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.52■□□□□ 0.4
Trim23Q8BGX0 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim23Q8BGX0 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim23Q8BGX0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Trim23Q8BGX0 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim23Q8BGX0 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim23Q8BGX0 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.51■□□□□ 0.39
Trim23Q8BGX0 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.51■□□□□ 0.39
Trim23Q8BGX0 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.51■□□□□ 0.39
Trim23Q8BGX0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim23Q8BGX0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim23Q8BGX0 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.51■□□□□ 0.39
Trim23Q8BGX0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim23Q8BGX0 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim23Q8BGX0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim23Q8BGX0 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
Trim23Q8BGX0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim23Q8BGX0 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.51■□□□□ 0.39
Trim23Q8BGX0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim23Q8BGX0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim23Q8BGX0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim23Q8BGX0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim23Q8BGX0 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim23Q8BGX0 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Trim23Q8BGX0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim23Q8BGX0 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim23Q8BGX0 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim23Q8BGX0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.5■□□□□ 0.39
Trim23Q8BGX0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim23Q8BGX0 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Trim23Q8BGX0 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim23Q8BGX0 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim23Q8BGX0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim23Q8BGX0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim23Q8BGX0 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim23Q8BGX0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Trim23Q8BGX0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim23Q8BGX0 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim23Q8BGX0 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.49■□□□□ 0.39
Trim23Q8BGX0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Trim23Q8BGX0 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Trim23Q8BGX0 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim23Q8BGX0 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim23Q8BGX0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim23Q8BGX0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim23Q8BGX0 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.49■□□□□ 0.39
Trim23Q8BGX0 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim23Q8BGX0 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim23Q8BGX0 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.49■□□□□ 0.39
Trim23Q8BGX0 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim23Q8BGX0 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim23Q8BGX0 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.48■□□□□ 0.39
Trim23Q8BGX0 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim23Q8BGX0 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim23Q8BGX0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trim23Q8BGX0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim23Q8BGX0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms