Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Samm50Q8BGH2 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Samm50Q8BGH2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC21.27■■□□□ 1
Samm50Q8BGH2 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Samm50Q8BGH2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Samm50Q8BGH2 Gm6420-201ENSMUST00000193885 723 ntBASIC21.27■■□□□ 1
Samm50Q8BGH2 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.27■■□□□ 1
Samm50Q8BGH2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.27■■□□□ 1
Samm50Q8BGH2 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Samm50Q8BGH2 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Samm50Q8BGH2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Samm50Q8BGH2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC21.27■□□□□ 0.99
Samm50Q8BGH2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Samm50Q8BGH2 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Samm50Q8BGH2 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Samm50Q8BGH2 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Samm50Q8BGH2 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Samm50Q8BGH2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC21.26■□□□□ 0.99
Samm50Q8BGH2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Samm50Q8BGH2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Samm50Q8BGH2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Samm50Q8BGH2 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Samm50Q8BGH2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Samm50Q8BGH2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Samm50Q8BGH2 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Samm50Q8BGH2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Samm50Q8BGH2 Gm27032-201ENSMUST00000183124 1116 ntBASIC21.26■□□□□ 0.99
Samm50Q8BGH2 Gm10602-201ENSMUST00000098239 609 ntBASIC21.26■□□□□ 0.99
Samm50Q8BGH2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Samm50Q8BGH2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Samm50Q8BGH2 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Samm50Q8BGH2 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC21.26■□□□□ 0.99
Samm50Q8BGH2 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Samm50Q8BGH2 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Samm50Q8BGH2 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Samm50Q8BGH2 Nespas-201ENSMUST00000143738 1083 ntBASIC21.25■□□□□ 0.99
Samm50Q8BGH2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.25■□□□□ 0.99
Samm50Q8BGH2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Samm50Q8BGH2 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Samm50Q8BGH2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Samm50Q8BGH2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC21.25■□□□□ 0.99
Samm50Q8BGH2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Samm50Q8BGH2 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Samm50Q8BGH2 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Samm50Q8BGH2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Samm50Q8BGH2 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Samm50Q8BGH2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Samm50Q8BGH2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Samm50Q8BGH2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Samm50Q8BGH2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Samm50Q8BGH2 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Samm50Q8BGH2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Samm50Q8BGH2 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Samm50Q8BGH2 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC21.23■□□□□ 0.99
Samm50Q8BGH2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Samm50Q8BGH2 Gm43702-201ENSMUST00000198772 2546 ntBASIC21.23■□□□□ 0.99
Samm50Q8BGH2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC21.23■□□□□ 0.99
Samm50Q8BGH2 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Samm50Q8BGH2 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Samm50Q8BGH2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC21.23■□□□□ 0.99
Samm50Q8BGH2 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Samm50Q8BGH2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
Samm50Q8BGH2 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Samm50Q8BGH2 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Samm50Q8BGH2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Samm50Q8BGH2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Samm50Q8BGH2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Samm50Q8BGH2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Samm50Q8BGH2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Samm50Q8BGH2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Samm50Q8BGH2 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Samm50Q8BGH2 Fst-202ENSMUST00000223640 2612 ntBASIC21.23■□□□□ 0.99
Samm50Q8BGH2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Samm50Q8BGH2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Samm50Q8BGH2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Samm50Q8BGH2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Samm50Q8BGH2 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Samm50Q8BGH2 Gm12933-201ENSMUST00000120203 872 ntBASIC21.22■□□□□ 0.99
Samm50Q8BGH2 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Samm50Q8BGH2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Samm50Q8BGH2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Samm50Q8BGH2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
Samm50Q8BGH2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Samm50Q8BGH2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Samm50Q8BGH2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Samm50Q8BGH2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Samm50Q8BGH2 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Samm50Q8BGH2 Gm10655-201ENSMUST00000098658 1397 ntBASIC21.22■□□□□ 0.99
Samm50Q8BGH2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Samm50Q8BGH2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Samm50Q8BGH2 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Samm50Q8BGH2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Samm50Q8BGH2 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Samm50Q8BGH2 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.21■□□□□ 0.99
Samm50Q8BGH2 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Samm50Q8BGH2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Samm50Q8BGH2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Samm50Q8BGH2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Samm50Q8BGH2 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Samm50Q8BGH2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms