Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Rpap1Q80TE0 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Rpap1Q80TE0 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Rpap1Q80TE0 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Rpap1Q80TE0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC28.37■■■□□ 2.13
Rpap1Q80TE0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC28.37■■■□□ 2.13
Rpap1Q80TE0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC28.37■■■□□ 2.13
Rpap1Q80TE0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
Rpap1Q80TE0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC28.36■■■□□ 2.13
Rpap1Q80TE0 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
Rpap1Q80TE0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Rpap1Q80TE0 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
Rpap1Q80TE0 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Rpap1Q80TE0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
Rpap1Q80TE0 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Rpap1Q80TE0 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Rpap1Q80TE0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC28.35■■■□□ 2.13
Rpap1Q80TE0 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
Rpap1Q80TE0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Rpap1Q80TE0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Rpap1Q80TE0 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Rpap1Q80TE0 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Rpap1Q80TE0 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
Rpap1Q80TE0 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Rpap1Q80TE0 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Rpap1Q80TE0 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC28.34■■■□□ 2.13
Rpap1Q80TE0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Rpap1Q80TE0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Rpap1Q80TE0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC28.34■■■□□ 2.13
Rpap1Q80TE0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Rpap1Q80TE0 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
Rpap1Q80TE0 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
Rpap1Q80TE0 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
Rpap1Q80TE0 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Rpap1Q80TE0 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Rpap1Q80TE0 Gm9103-201ENSMUST00000119371 405 ntBASIC28.34■■■□□ 2.13
Rpap1Q80TE0 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
Rpap1Q80TE0 Mir5130-201ENSMUST00000175160 84 ntBASIC28.34■■■□□ 2.13
Rpap1Q80TE0 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC28.34■■■□□ 2.13
Rpap1Q80TE0 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
Rpap1Q80TE0 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Rpap1Q80TE0 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC28.33■■■□□ 2.13
Rpap1Q80TE0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
Rpap1Q80TE0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
Rpap1Q80TE0 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.13
Rpap1Q80TE0 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Rpap1Q80TE0 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Rpap1Q80TE0 Gm15853-202ENSMUST00000195518 2041 ntBASIC28.33■■■□□ 2.12
Rpap1Q80TE0 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Rpap1Q80TE0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Rpap1Q80TE0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
Rpap1Q80TE0 Gm38027-201ENSMUST00000192315 235 ntBASIC28.32■■■□□ 2.12
Rpap1Q80TE0 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Rpap1Q80TE0 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Rpap1Q80TE0 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Rpap1Q80TE0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Rpap1Q80TE0 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
Rpap1Q80TE0 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Rpap1Q80TE0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Rpap1Q80TE0 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
Rpap1Q80TE0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Rpap1Q80TE0 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Rpap1Q80TE0 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Rpap1Q80TE0 AC134329.2-201ENSMUST00000217897 428 ntBASIC28.31■■■□□ 2.12
Rpap1Q80TE0 AC154471.1-201ENSMUST00000224418 436 ntBASIC28.31■■■□□ 2.12
Rpap1Q80TE0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
Rpap1Q80TE0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Rpap1Q80TE0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC28.31■■■□□ 2.12
Rpap1Q80TE0 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
Rpap1Q80TE0 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC28.3■■■□□ 2.12
Rpap1Q80TE0 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
Rpap1Q80TE0 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Rpap1Q80TE0 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Rpap1Q80TE0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC28.3■■■□□ 2.12
Rpap1Q80TE0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC28.3■■■□□ 2.12
Rpap1Q80TE0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
Rpap1Q80TE0 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC28.29■■■□□ 2.12
Rpap1Q80TE0 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC28.29■■■□□ 2.12
Rpap1Q80TE0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC28.29■■■□□ 2.12
Rpap1Q80TE0 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC28.29■■■□□ 2.12
Rpap1Q80TE0 Gm38345-201ENSMUST00000192635 1748 ntBASIC28.29■■■□□ 2.12
Rpap1Q80TE0 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC28.29■■■□□ 2.12
Rpap1Q80TE0 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
Rpap1Q80TE0 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
Rpap1Q80TE0 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Rpap1Q80TE0 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Rpap1Q80TE0 Gm14464-201ENSMUST00000119658 1254 ntBASIC28.28■■■□□ 2.12
Rpap1Q80TE0 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Rpap1Q80TE0 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Rpap1Q80TE0 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Rpap1Q80TE0 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Rpap1Q80TE0 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Rpap1Q80TE0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC28.28■■■□□ 2.12
Rpap1Q80TE0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Rpap1Q80TE0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Rpap1Q80TE0 Gm45906-201ENSMUST00000208911 1430 ntBASIC28.28■■■□□ 2.12
Rpap1Q80TE0 Gm9194-201ENSMUST00000220749 1447 ntBASIC28.28■■■□□ 2.12
Rpap1Q80TE0 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Rpap1Q80TE0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Rpap1Q80TE0 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms