Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx4Q7TNK1 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx4Q7TNK1 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx4Q7TNK1 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx4Q7TNK1 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.47■□□□□ 0.39
Rfx4Q7TNK1 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx4Q7TNK1 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx4Q7TNK1 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx4Q7TNK1 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Rfx4Q7TNK1 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx4Q7TNK1 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Rfx4Q7TNK1 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Rfx4Q7TNK1 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.46■□□□□ 0.39
Rfx4Q7TNK1 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.46■□□□□ 0.39
Rfx4Q7TNK1 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx4Q7TNK1 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Rfx4Q7TNK1 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx4Q7TNK1 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Rfx4Q7TNK1 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx4Q7TNK1 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx4Q7TNK1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx4Q7TNK1 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx4Q7TNK1 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx4Q7TNK1 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx4Q7TNK1 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rfx4Q7TNK1 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Rfx4Q7TNK1 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx4Q7TNK1 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx4Q7TNK1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx4Q7TNK1 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx4Q7TNK1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx4Q7TNK1 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx4Q7TNK1 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx4Q7TNK1 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx4Q7TNK1 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx4Q7TNK1 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.45■□□□□ 0.38
Rfx4Q7TNK1 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx4Q7TNK1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.45■□□□□ 0.38
Rfx4Q7TNK1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.45■□□□□ 0.38
Rfx4Q7TNK1 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Rfx4Q7TNK1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx4Q7TNK1 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Rfx4Q7TNK1 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx4Q7TNK1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx4Q7TNK1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx4Q7TNK1 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx4Q7TNK1 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx4Q7TNK1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.44■□□□□ 0.38
Rfx4Q7TNK1 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx4Q7TNK1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx4Q7TNK1 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx4Q7TNK1 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx4Q7TNK1 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx4Q7TNK1 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.44■□□□□ 0.38
Rfx4Q7TNK1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx4Q7TNK1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.44■□□□□ 0.38
Rfx4Q7TNK1 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx4Q7TNK1 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Rfx4Q7TNK1 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx4Q7TNK1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx4Q7TNK1 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx4Q7TNK1 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx4Q7TNK1 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx4Q7TNK1 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx4Q7TNK1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx4Q7TNK1 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx4Q7TNK1 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx4Q7TNK1 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx4Q7TNK1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx4Q7TNK1 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx4Q7TNK1 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Rfx4Q7TNK1 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx4Q7TNK1 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx4Q7TNK1 Gm12922-201ENSMUST00000120626 809 ntBASIC17.43■□□□□ 0.38
Rfx4Q7TNK1 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.43■□□□□ 0.38
Rfx4Q7TNK1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.43■□□□□ 0.38
Rfx4Q7TNK1 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Rfx4Q7TNK1 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx4Q7TNK1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx4Q7TNK1 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx4Q7TNK1 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx4Q7TNK1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.43■□□□□ 0.38
Rfx4Q7TNK1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx4Q7TNK1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx4Q7TNK1 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
Rfx4Q7TNK1 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx4Q7TNK1 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx4Q7TNK1 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx4Q7TNK1 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx4Q7TNK1 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx4Q7TNK1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.42■□□□□ 0.38
Rfx4Q7TNK1 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx4Q7TNK1 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx4Q7TNK1 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.42■□□□□ 0.38
Rfx4Q7TNK1 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx4Q7TNK1 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx4Q7TNK1 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx4Q7TNK1 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx4Q7TNK1 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx4Q7TNK1 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms