Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Npc1l1Q6T3U4 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Npc1l1Q6T3U4 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Npc1l1Q6T3U4 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Npc1l1Q6T3U4 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.88■■□□□ 1.09
Npc1l1Q6T3U4 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC21.87■■□□□ 1.09
Npc1l1Q6T3U4 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Npc1l1Q6T3U4 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Npc1l1Q6T3U4 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Npc1l1Q6T3U4 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Npc1l1Q6T3U4 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Npc1l1Q6T3U4 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC21.87■■□□□ 1.09
Npc1l1Q6T3U4 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Npc1l1Q6T3U4 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Npc1l1Q6T3U4 AC121961.1-201ENSMUST00000218594 1779 ntBASIC21.86■■□□□ 1.09
Npc1l1Q6T3U4 Gm11927-201ENSMUST00000118472 759 ntBASIC21.86■■□□□ 1.09
Npc1l1Q6T3U4 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Npc1l1Q6T3U4 AC130671.1-201ENSMUST00000227384 1237 ntBASIC21.86■■□□□ 1.09
Npc1l1Q6T3U4 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Npc1l1Q6T3U4 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Npc1l1Q6T3U4 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Npc1l1Q6T3U4 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Npc1l1Q6T3U4 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Npc1l1Q6T3U4 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Npc1l1Q6T3U4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Npc1l1Q6T3U4 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Npc1l1Q6T3U4 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Npc1l1Q6T3U4 Gm38308-201ENSMUST00000194934 1809 ntBASIC21.86■■□□□ 1.09
Npc1l1Q6T3U4 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Npc1l1Q6T3U4 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Npc1l1Q6T3U4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Npc1l1Q6T3U4 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
Npc1l1Q6T3U4 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Npc1l1Q6T3U4 Gm9484-201ENSMUST00000195892 1159 ntBASIC21.85■■□□□ 1.09
Npc1l1Q6T3U4 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Npc1l1Q6T3U4 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Npc1l1Q6T3U4 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.85■■□□□ 1.09
Npc1l1Q6T3U4 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Npc1l1Q6T3U4 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Npc1l1Q6T3U4 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Npc1l1Q6T3U4 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Npc1l1Q6T3U4 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Npc1l1Q6T3U4 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Npc1l1Q6T3U4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Npc1l1Q6T3U4 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC21.84■■□□□ 1.09
Npc1l1Q6T3U4 Gm15378-201ENSMUST00000121894 207 ntBASIC21.84■■□□□ 1.09
Npc1l1Q6T3U4 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC21.84■■□□□ 1.09
Npc1l1Q6T3U4 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC21.84■■□□□ 1.09
Npc1l1Q6T3U4 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC21.84■■□□□ 1.09
Npc1l1Q6T3U4 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Npc1l1Q6T3U4 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC21.84■■□□□ 1.09
Npc1l1Q6T3U4 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC21.84■■□□□ 1.09
Npc1l1Q6T3U4 Gm38342-201ENSMUST00000195710 2980 ntBASIC21.84■■□□□ 1.09
Npc1l1Q6T3U4 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Npc1l1Q6T3U4 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Npc1l1Q6T3U4 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Npc1l1Q6T3U4 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Npc1l1Q6T3U4 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC21.83■■□□□ 1.09
Npc1l1Q6T3U4 H2-K2-201ENSMUST00000174250 1049 ntBASIC21.83■■□□□ 1.09
Npc1l1Q6T3U4 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
Npc1l1Q6T3U4 Gm37055-201ENSMUST00000191866 133 ntBASIC21.83■■□□□ 1.09
Npc1l1Q6T3U4 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Npc1l1Q6T3U4 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
Npc1l1Q6T3U4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Npc1l1Q6T3U4 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Npc1l1Q6T3U4 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Npc1l1Q6T3U4 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Npc1l1Q6T3U4 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Npc1l1Q6T3U4 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Npc1l1Q6T3U4 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC21.82■■□□□ 1.08
Npc1l1Q6T3U4 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Npc1l1Q6T3U4 Zfp783-201ENSMUST00000095946 670 ntBASIC21.82■■□□□ 1.08
Npc1l1Q6T3U4 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Npc1l1Q6T3U4 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Npc1l1Q6T3U4 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Npc1l1Q6T3U4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Npc1l1Q6T3U4 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Npc1l1Q6T3U4 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Npc1l1Q6T3U4 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Npc1l1Q6T3U4 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Npc1l1Q6T3U4 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC21.81■■□□□ 1.08
Npc1l1Q6T3U4 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Npc1l1Q6T3U4 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Npc1l1Q6T3U4 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC21.81■■□□□ 1.08
Npc1l1Q6T3U4 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Npc1l1Q6T3U4 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Npc1l1Q6T3U4 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Npc1l1Q6T3U4 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Npc1l1Q6T3U4 Mir1199-201ENSMUST00000117015 119 ntBASIC21.8■■□□□ 1.08
Npc1l1Q6T3U4 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Npc1l1Q6T3U4 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Npc1l1Q6T3U4 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
Npc1l1Q6T3U4 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC21.8■■□□□ 1.08
Npc1l1Q6T3U4 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Npc1l1Q6T3U4 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Npc1l1Q6T3U4 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Npc1l1Q6T3U4 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Npc1l1Q6T3U4 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Npc1l1Q6T3U4 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Npc1l1Q6T3U4 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms