Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scn10aQ6QIY3 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.83■□□□□ 0.92
Scn10aQ6QIY3 Gm16061-201ENSMUST00000122167 857 ntBASIC20.83■□□□□ 0.92
Scn10aQ6QIY3 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC20.83■□□□□ 0.92
Scn10aQ6QIY3 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Scn10aQ6QIY3 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Scn10aQ6QIY3 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Scn10aQ6QIY3 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.83■□□□□ 0.92
Scn10aQ6QIY3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn10aQ6QIY3 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC20.82■□□□□ 0.92
Scn10aQ6QIY3 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn10aQ6QIY3 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn10aQ6QIY3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Scn10aQ6QIY3 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn10aQ6QIY3 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Scn10aQ6QIY3 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn10aQ6QIY3 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.82■□□□□ 0.92
Scn10aQ6QIY3 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
Scn10aQ6QIY3 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Scn10aQ6QIY3 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.82■□□□□ 0.92
Scn10aQ6QIY3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Scn10aQ6QIY3 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Scn10aQ6QIY3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn10aQ6QIY3 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn10aQ6QIY3 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC20.81■□□□□ 0.92
Scn10aQ6QIY3 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Scn10aQ6QIY3 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.81■□□□□ 0.92
Scn10aQ6QIY3 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Scn10aQ6QIY3 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Scn10aQ6QIY3 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.81■□□□□ 0.92
Scn10aQ6QIY3 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn10aQ6QIY3 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn10aQ6QIY3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn10aQ6QIY3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.81■□□□□ 0.92
Scn10aQ6QIY3 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Scn10aQ6QIY3 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Scn10aQ6QIY3 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn10aQ6QIY3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Scn10aQ6QIY3 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn10aQ6QIY3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Scn10aQ6QIY3 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.8■□□□□ 0.92
Scn10aQ6QIY3 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Scn10aQ6QIY3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn10aQ6QIY3 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn10aQ6QIY3 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn10aQ6QIY3 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Scn10aQ6QIY3 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Scn10aQ6QIY3 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn10aQ6QIY3 Gm22697-201ENSMUST00000175194 63 ntBASIC20.79■□□□□ 0.92
Scn10aQ6QIY3 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC20.79■□□□□ 0.92
Scn10aQ6QIY3 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC20.79■□□□□ 0.92
Scn10aQ6QIY3 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.79■□□□□ 0.92
Scn10aQ6QIY3 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scn10aQ6QIY3 Gm4974-201ENSMUST00000209974 875 ntBASIC20.79■□□□□ 0.92
Scn10aQ6QIY3 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.79■□□□□ 0.92
Scn10aQ6QIY3 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Scn10aQ6QIY3 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scn10aQ6QIY3 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scn10aQ6QIY3 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Scn10aQ6QIY3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn10aQ6QIY3 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn10aQ6QIY3 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.78■□□□□ 0.92
Scn10aQ6QIY3 Gm7370-201ENSMUST00000219471 767 ntBASIC20.78■□□□□ 0.92
Scn10aQ6QIY3 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.78■□□□□ 0.92
Scn10aQ6QIY3 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn10aQ6QIY3 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Scn10aQ6QIY3 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn10aQ6QIY3 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Scn10aQ6QIY3 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn10aQ6QIY3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn10aQ6QIY3 Gm14859-201ENSMUST00000117752 357 ntBASIC20.77■□□□□ 0.92
Scn10aQ6QIY3 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Scn10aQ6QIY3 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Scn10aQ6QIY3 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Scn10aQ6QIY3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn10aQ6QIY3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn10aQ6QIY3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn10aQ6QIY3 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Scn10aQ6QIY3 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC20.77■□□□□ 0.92
Scn10aQ6QIY3 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Scn10aQ6QIY3 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
Scn10aQ6QIY3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Scn10aQ6QIY3 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn10aQ6QIY3 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn10aQ6QIY3 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.76■□□□□ 0.91
Scn10aQ6QIY3 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn10aQ6QIY3 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Scn10aQ6QIY3 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.76■□□□□ 0.91
Scn10aQ6QIY3 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Scn10aQ6QIY3 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn10aQ6QIY3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn10aQ6QIY3 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn10aQ6QIY3 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn10aQ6QIY3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn10aQ6QIY3 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn10aQ6QIY3 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.75■□□□□ 0.91
Scn10aQ6QIY3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Scn10aQ6QIY3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn10aQ6QIY3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn10aQ6QIY3 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms