Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Dhx40Q6PE54 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Dhx40Q6PE54 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.22■□□□□ 0.83
Dhx40Q6PE54 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Dhx40Q6PE54 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Dhx40Q6PE54 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Dhx40Q6PE54 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Dhx40Q6PE54 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Dhx40Q6PE54 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Dhx40Q6PE54 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Dhx40Q6PE54 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Dhx40Q6PE54 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Dhx40Q6PE54 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Dhx40Q6PE54 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Dhx40Q6PE54 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Dhx40Q6PE54 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Dhx40Q6PE54 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.21■□□□□ 0.83
Dhx40Q6PE54 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Dhx40Q6PE54 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Dhx40Q6PE54 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Dhx40Q6PE54 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Dhx40Q6PE54 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Dhx40Q6PE54 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Dhx40Q6PE54 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Dhx40Q6PE54 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Dhx40Q6PE54 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.2■□□□□ 0.82
Dhx40Q6PE54 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Dhx40Q6PE54 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.2■□□□□ 0.82
Dhx40Q6PE54 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Dhx40Q6PE54 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Dhx40Q6PE54 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Dhx40Q6PE54 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Dhx40Q6PE54 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Dhx40Q6PE54 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Dhx40Q6PE54 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Dhx40Q6PE54 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Dhx40Q6PE54 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Dhx40Q6PE54 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Dhx40Q6PE54 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
Dhx40Q6PE54 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Dhx40Q6PE54 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Dhx40Q6PE54 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.19■□□□□ 0.82
Dhx40Q6PE54 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Dhx40Q6PE54 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Dhx40Q6PE54 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Dhx40Q6PE54 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Dhx40Q6PE54 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.19■□□□□ 0.82
Dhx40Q6PE54 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Dhx40Q6PE54 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Dhx40Q6PE54 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Dhx40Q6PE54 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Dhx40Q6PE54 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dhx40Q6PE54 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dhx40Q6PE54 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dhx40Q6PE54 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dhx40Q6PE54 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.18■□□□□ 0.82
Dhx40Q6PE54 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dhx40Q6PE54 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dhx40Q6PE54 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20.18■□□□□ 0.82
Dhx40Q6PE54 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dhx40Q6PE54 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dhx40Q6PE54 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dhx40Q6PE54 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dhx40Q6PE54 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Dhx40Q6PE54 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.18■□□□□ 0.82
Dhx40Q6PE54 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
Dhx40Q6PE54 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.18■□□□□ 0.82
Dhx40Q6PE54 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.18■□□□□ 0.82
Dhx40Q6PE54 Gm43060-201ENSMUST00000200621 289 ntBASIC20.18■□□□□ 0.82
Dhx40Q6PE54 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.18■□□□□ 0.82
Dhx40Q6PE54 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dhx40Q6PE54 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dhx40Q6PE54 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Dhx40Q6PE54 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dhx40Q6PE54 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Dhx40Q6PE54 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dhx40Q6PE54 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Dhx40Q6PE54 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Dhx40Q6PE54 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.17■□□□□ 0.82
Dhx40Q6PE54 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Dhx40Q6PE54 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Dhx40Q6PE54 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Dhx40Q6PE54 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Dhx40Q6PE54 Gm13146-201ENSMUST00000118508 780 ntBASIC20.17■□□□□ 0.82
Dhx40Q6PE54 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Dhx40Q6PE54 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Dhx40Q6PE54 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Dhx40Q6PE54 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Dhx40Q6PE54 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Dhx40Q6PE54 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
Dhx40Q6PE54 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Dhx40Q6PE54 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Dhx40Q6PE54 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Dhx40Q6PE54 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Dhx40Q6PE54 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.16■□□□□ 0.82
Dhx40Q6PE54 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Dhx40Q6PE54 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.16■□□□□ 0.82
Dhx40Q6PE54 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Dhx40Q6PE54 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Dhx40Q6PE54 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms