Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Six2Q62232 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Six2Q62232 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Six2Q62232 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Six2Q62232 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Six2Q62232 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Six2Q62232 Gm13148-201ENSMUST00000118892 745 ntBASIC19.43■□□□□ 0.7
Six2Q62232 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Six2Q62232 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.43■□□□□ 0.7
Six2Q62232 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Six2Q62232 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Six2Q62232 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Six2Q62232 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Six2Q62232 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.42■□□□□ 0.7
Six2Q62232 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Six2Q62232 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Six2Q62232 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Six2Q62232 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Six2Q62232 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Six2Q62232 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Six2Q62232 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Six2Q62232 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Six2Q62232 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Six2Q62232 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Six2Q62232 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Six2Q62232 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Six2Q62232 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Six2Q62232 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Six2Q62232 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Six2Q62232 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Six2Q62232 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Six2Q62232 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Six2Q62232 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Six2Q62232 Gm7290-201ENSMUST00000104990 617 ntBASIC19.41■□□□□ 0.7
Six2Q62232 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.41■□□□□ 0.7
Six2Q62232 Gm12918-201ENSMUST00000120234 636 ntBASIC19.41■□□□□ 0.7
Six2Q62232 Gm15710-201ENSMUST00000121821 636 ntBASIC19.41■□□□□ 0.7
Six2Q62232 Gm5075-201ENSMUST00000196916 622 ntBASIC19.41■□□□□ 0.7
Six2Q62232 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Six2Q62232 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.41■□□□□ 0.7
Six2Q62232 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.41■□□□□ 0.7
Six2Q62232 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Six2Q62232 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.41■□□□□ 0.7
Six2Q62232 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.41■□□□□ 0.7
Six2Q62232 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Six2Q62232 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Six2Q62232 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Six2Q62232 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Six2Q62232 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Six2Q62232 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.4■□□□□ 0.7
Six2Q62232 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Six2Q62232 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Six2Q62232 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Six2Q62232 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Six2Q62232 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Six2Q62232 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Six2Q62232 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Six2Q62232 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Six2Q62232 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Six2Q62232 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.39■□□□□ 0.69
Six2Q62232 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Six2Q62232 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.39■□□□□ 0.69
Six2Q62232 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.39■□□□□ 0.69
Six2Q62232 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Six2Q62232 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Six2Q62232 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Six2Q62232 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Six2Q62232 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Six2Q62232 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.39■□□□□ 0.69
Six2Q62232 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Six2Q62232 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Six2Q62232 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Six2Q62232 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Six2Q62232 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.38■□□□□ 0.69
Six2Q62232 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Six2Q62232 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Six2Q62232 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Six2Q62232 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.37■□□□□ 0.69
Six2Q62232 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Six2Q62232 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.37■□□□□ 0.69
Six2Q62232 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Six2Q62232 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Six2Q62232 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Six2Q62232 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.37■□□□□ 0.69
Six2Q62232 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.37■□□□□ 0.69
Six2Q62232 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Six2Q62232 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Six2Q62232 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Six2Q62232 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Six2Q62232 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Six2Q62232 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Six2Q62232 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.36■□□□□ 0.69
Six2Q62232 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.36■□□□□ 0.69
Six2Q62232 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Six2Q62232 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Six2Q62232 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Six2Q62232 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Six2Q62232 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Six2Q62232 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Six2Q62232 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms