Protein–RNA interactions for Protein: Q61056

Trpc1, Short transient receptor potential channel 1, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpc1Q61056 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trpc1Q61056 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.71■□□□□ 0.43
Trpc1Q61056 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trpc1Q61056 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trpc1Q61056 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Trpc1Q61056 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trpc1Q61056 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trpc1Q61056 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.71■□□□□ 0.43
Trpc1Q61056 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trpc1Q61056 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.71■□□□□ 0.43
Trpc1Q61056 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.71■□□□□ 0.43
Trpc1Q61056 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.71■□□□□ 0.43
Trpc1Q61056 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trpc1Q61056 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trpc1Q61056 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trpc1Q61056 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trpc1Q61056 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trpc1Q61056 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trpc1Q61056 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trpc1Q61056 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trpc1Q61056 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.7■□□□□ 0.42
Trpc1Q61056 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trpc1Q61056 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trpc1Q61056 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trpc1Q61056 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.7■□□□□ 0.42
Trpc1Q61056 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trpc1Q61056 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trpc1Q61056 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trpc1Q61056 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trpc1Q61056 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trpc1Q61056 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trpc1Q61056 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trpc1Q61056 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trpc1Q61056 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Trpc1Q61056 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trpc1Q61056 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trpc1Q61056 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Trpc1Q61056 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trpc1Q61056 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.69■□□□□ 0.42
Trpc1Q61056 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Trpc1Q61056 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trpc1Q61056 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Trpc1Q61056 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.69■□□□□ 0.42
Trpc1Q61056 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trpc1Q61056 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trpc1Q61056 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trpc1Q61056 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trpc1Q61056 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trpc1Q61056 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trpc1Q61056 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trpc1Q61056 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Trpc1Q61056 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.68■□□□□ 0.42
Trpc1Q61056 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trpc1Q61056 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trpc1Q61056 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trpc1Q61056 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.68■□□□□ 0.42
Trpc1Q61056 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trpc1Q61056 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trpc1Q61056 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trpc1Q61056 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trpc1Q61056 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trpc1Q61056 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trpc1Q61056 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.67■□□□□ 0.42
Trpc1Q61056 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
Trpc1Q61056 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.67■□□□□ 0.42
Trpc1Q61056 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trpc1Q61056 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trpc1Q61056 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trpc1Q61056 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trpc1Q61056 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Trpc1Q61056 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.67■□□□□ 0.42
Trpc1Q61056 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.67■□□□□ 0.42
Trpc1Q61056 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trpc1Q61056 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trpc1Q61056 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trpc1Q61056 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trpc1Q61056 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.66■□□□□ 0.42
Trpc1Q61056 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trpc1Q61056 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trpc1Q61056 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trpc1Q61056 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trpc1Q61056 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trpc1Q61056 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trpc1Q61056 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trpc1Q61056 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trpc1Q61056 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.66■□□□□ 0.42
Trpc1Q61056 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Trpc1Q61056 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trpc1Q61056 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trpc1Q61056 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trpc1Q61056 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trpc1Q61056 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trpc1Q61056 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trpc1Q61056 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trpc1Q61056 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trpc1Q61056 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trpc1Q61056 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trpc1Q61056 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trpc1Q61056 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Trpc1Q61056 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms