Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atp13a4Q5XF90 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atp13a4Q5XF90 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Atp13a4Q5XF90 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.67■□□□□ 0.74
Atp13a4Q5XF90 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atp13a4Q5XF90 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atp13a4Q5XF90 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Atp13a4Q5XF90 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.67■□□□□ 0.74
Atp13a4Q5XF90 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.67■□□□□ 0.74
Atp13a4Q5XF90 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Atp13a4Q5XF90 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Atp13a4Q5XF90 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atp13a4Q5XF90 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Atp13a4Q5XF90 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atp13a4Q5XF90 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.66■□□□□ 0.74
Atp13a4Q5XF90 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.66■□□□□ 0.74
Atp13a4Q5XF90 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Atp13a4Q5XF90 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Atp13a4Q5XF90 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Atp13a4Q5XF90 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atp13a4Q5XF90 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atp13a4Q5XF90 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Atp13a4Q5XF90 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atp13a4Q5XF90 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atp13a4Q5XF90 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atp13a4Q5XF90 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.65■□□□□ 0.74
Atp13a4Q5XF90 Rab3c-203ENSMUST00000224180 967 ntBASIC19.65■□□□□ 0.74
Atp13a4Q5XF90 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.65■□□□□ 0.74
Atp13a4Q5XF90 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atp13a4Q5XF90 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atp13a4Q5XF90 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Atp13a4Q5XF90 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Atp13a4Q5XF90 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Atp13a4Q5XF90 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Atp13a4Q5XF90 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Atp13a4Q5XF90 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Atp13a4Q5XF90 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atp13a4Q5XF90 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.64■□□□□ 0.73
Atp13a4Q5XF90 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.64■□□□□ 0.73
Atp13a4Q5XF90 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atp13a4Q5XF90 Tgds-204ENSMUST00000228543 1594 ntBASIC19.64■□□□□ 0.73
Atp13a4Q5XF90 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atp13a4Q5XF90 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atp13a4Q5XF90 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.64■□□□□ 0.73
Atp13a4Q5XF90 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atp13a4Q5XF90 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atp13a4Q5XF90 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.63■□□□□ 0.73
Atp13a4Q5XF90 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atp13a4Q5XF90 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atp13a4Q5XF90 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atp13a4Q5XF90 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atp13a4Q5XF90 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atp13a4Q5XF90 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atp13a4Q5XF90 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atp13a4Q5XF90 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atp13a4Q5XF90 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.63■□□□□ 0.73
Atp13a4Q5XF90 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atp13a4Q5XF90 Gm5408-201ENSMUST00000197998 747 ntBASIC19.63■□□□□ 0.73
Atp13a4Q5XF90 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.63■□□□□ 0.73
Atp13a4Q5XF90 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.63■□□□□ 0.73
Atp13a4Q5XF90 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.63■□□□□ 0.73
Atp13a4Q5XF90 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atp13a4Q5XF90 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.63■□□□□ 0.73
Atp13a4Q5XF90 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Atp13a4Q5XF90 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atp13a4Q5XF90 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atp13a4Q5XF90 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atp13a4Q5XF90 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atp13a4Q5XF90 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atp13a4Q5XF90 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.62■□□□□ 0.73
Atp13a4Q5XF90 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atp13a4Q5XF90 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atp13a4Q5XF90 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atp13a4Q5XF90 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atp13a4Q5XF90 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Atp13a4Q5XF90 Gm44549-201ENSMUST00000208351 577 ntBASIC19.62■□□□□ 0.73
Atp13a4Q5XF90 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atp13a4Q5XF90 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atp13a4Q5XF90 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Atp13a4Q5XF90 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Atp13a4Q5XF90 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atp13a4Q5XF90 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atp13a4Q5XF90 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Atp13a4Q5XF90 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Atp13a4Q5XF90 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atp13a4Q5XF90 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atp13a4Q5XF90 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Atp13a4Q5XF90 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atp13a4Q5XF90 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.61■□□□□ 0.73
Atp13a4Q5XF90 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atp13a4Q5XF90 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atp13a4Q5XF90 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.61■□□□□ 0.73
Atp13a4Q5XF90 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atp13a4Q5XF90 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atp13a4Q5XF90 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atp13a4Q5XF90 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atp13a4Q5XF90 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Atp13a4Q5XF90 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atp13a4Q5XF90 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atp13a4Q5XF90 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms