Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Clhc1Q5M6W3 Serp2-204ENSMUST00000228055 705 ntBASIC17.57■□□□□ 0.4
Clhc1Q5M6W3 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clhc1Q5M6W3 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clhc1Q5M6W3 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Clhc1Q5M6W3 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Clhc1Q5M6W3 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clhc1Q5M6W3 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clhc1Q5M6W3 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clhc1Q5M6W3 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clhc1Q5M6W3 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clhc1Q5M6W3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Clhc1Q5M6W3 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clhc1Q5M6W3 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.56■□□□□ 0.4
Clhc1Q5M6W3 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Clhc1Q5M6W3 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.56■□□□□ 0.4
Clhc1Q5M6W3 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clhc1Q5M6W3 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.56■□□□□ 0.4
Clhc1Q5M6W3 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.56■□□□□ 0.4
Clhc1Q5M6W3 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Clhc1Q5M6W3 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.56■□□□□ 0.4
Clhc1Q5M6W3 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Clhc1Q5M6W3 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Clhc1Q5M6W3 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Clhc1Q5M6W3 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Clhc1Q5M6W3 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Clhc1Q5M6W3 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clhc1Q5M6W3 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clhc1Q5M6W3 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clhc1Q5M6W3 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clhc1Q5M6W3 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clhc1Q5M6W3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clhc1Q5M6W3 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clhc1Q5M6W3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Clhc1Q5M6W3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clhc1Q5M6W3 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Clhc1Q5M6W3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.55■□□□□ 0.4
Clhc1Q5M6W3 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clhc1Q5M6W3 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Clhc1Q5M6W3 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.54■□□□□ 0.4
Clhc1Q5M6W3 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clhc1Q5M6W3 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clhc1Q5M6W3 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clhc1Q5M6W3 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clhc1Q5M6W3 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clhc1Q5M6W3 Gm26833-201ENSMUST00000180899 440 ntBASIC17.54■□□□□ 0.4
Clhc1Q5M6W3 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.54■□□□□ 0.4
Clhc1Q5M6W3 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.54■□□□□ 0.4
Clhc1Q5M6W3 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clhc1Q5M6W3 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Clhc1Q5M6W3 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clhc1Q5M6W3 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Clhc1Q5M6W3 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Clhc1Q5M6W3 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clhc1Q5M6W3 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Clhc1Q5M6W3 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clhc1Q5M6W3 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Clhc1Q5M6W3 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Clhc1Q5M6W3 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Clhc1Q5M6W3 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clhc1Q5M6W3 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Clhc1Q5M6W3 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.53■□□□□ 0.4
Clhc1Q5M6W3 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clhc1Q5M6W3 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clhc1Q5M6W3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clhc1Q5M6W3 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.53■□□□□ 0.4
Clhc1Q5M6W3 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clhc1Q5M6W3 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Clhc1Q5M6W3 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clhc1Q5M6W3 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clhc1Q5M6W3 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.52■□□□□ 0.4
Clhc1Q5M6W3 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clhc1Q5M6W3 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Clhc1Q5M6W3 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clhc1Q5M6W3 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.52■□□□□ 0.4
Clhc1Q5M6W3 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.52■□□□□ 0.4
Clhc1Q5M6W3 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.52■□□□□ 0.4
Clhc1Q5M6W3 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Clhc1Q5M6W3 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Clhc1Q5M6W3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clhc1Q5M6W3 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Clhc1Q5M6W3 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Clhc1Q5M6W3 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Clhc1Q5M6W3 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Clhc1Q5M6W3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Clhc1Q5M6W3 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Clhc1Q5M6W3 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clhc1Q5M6W3 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.51■□□□□ 0.39
Clhc1Q5M6W3 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clhc1Q5M6W3 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clhc1Q5M6W3 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Clhc1Q5M6W3 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Clhc1Q5M6W3 Gm8969-201ENSMUST00000199694 526 ntBASIC17.51■□□□□ 0.39
Clhc1Q5M6W3 Gm40848-201ENSMUST00000221998 324 ntBASIC17.51■□□□□ 0.39
Clhc1Q5M6W3 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clhc1Q5M6W3 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Clhc1Q5M6W3 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clhc1Q5M6W3 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Clhc1Q5M6W3 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clhc1Q5M6W3 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms